Xenopus laevis (African clawed frog): 380314
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Entry
380314 CDS
T01010
Symbol
ss18.L, ss18
Name
(RefSeq) synovial sarcoma translocation, chromosome 18 L homeolog
KO
K15623
protein SSXT
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
380314 (ss18.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xla03036
]
380314 (ss18.L)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
380314 (ss18.L)
GBAF(ncBAF) complex
380314 (ss18.L)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
380314
NCBI-ProteinID:
NP_001080622
Xenbase:
XB-GENE-995011
UniProt:
Q7ZXW1
A0A974CQ72
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Position
6L:complement(117397249..117430863)
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AA seq
386 aa
AA seq
DB search
MSVAFAAPRQRGKGDITPAAIQKMLDENNHLIQCIMDYQNKGKTSECSQYQQMLHTNLVY
LATIADSNQNTQPLLSALPTQNMPMGPAGMNQSGPPQPPRPHNMPSEGMVGGGPSAPHIQ
NQMNGQMPGPNHIAMQGPAPGQHNMPNSSMNMPSNNHGSMGGYNHSVPSSQNIPAQNQMT
MNQGQSMGNYGPRPNITMQPNQAAMMHQQPPSQQYTIPQGGQHYQGQQPPIGMMSQVNQG
NHMMGQRQIPPYRPSQQGPPQQFSGQEEYYGEQYSHGAQGPPESMNQQYYPEGNAQYSQQ
QETYQAPQQQQGYPPQQQQYAGQQAYPGQQQGYPPSQSAPGPQFPNYPQGQNQQYVQYRP
TQPGPPQPQQQRPYAYDQAQYGNYQQ
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtagctttcgcggctcccaggcagcgggggaagggggacatcactcctgcggcc
attcaaaagatgctggatgaaaacaaccatctaatacaatgcataatggattatcagaac
aaaggaaaaacctcagaatgttcccaatatcaacagatgctgcatacaaacttagtatac
ttggctacaatagcagactcaaaccagaatacccagcctttattgtcagcactacctaca
caaaatatgcctatgggtccagcagggatgaatcagagcggccctcctcaaccacctcgc
cctcacaacatgccttcagaagggatggtaggagggggtccgtctgcaccgcacatacag
aaccagatgaacggccagatgcctggaccaaaccatatcgctatgcaaggtccagcccct
ggacaacataatatgccaaatagttccatgaacatgccttcgaacaaccatggttccatg
ggaggctataaccattctgtgccatcctcacaaaatattccagcccagaatcagatgacc
atgaaccaaggccaatccatgggcaattatggtcctcggccgaatataaccatgcaacca
aatcaagctgctatgatgcaccaacagcctccctcacagcaatatactatacctcaggga
ggacaacattatcagggacaacagccaccaataggcatgatgagccaagttaaccaagga
aatcatatgatggggcaaaggcaaattccaccatacagaccctctcagcaaggtccaccc
caacaattctctggtcaggaagagtattatggagaacaatatagccatggtgctcaaggt
cccccagaaagcatgaatcagcaatactacccagaaggaaatgcgcaatacagtcaacag
caagaaacctatcaagcaccacagcagcagcaaggctacccacctcagcaacagcaatat
gctgggcagcaagcttatcctggtcagcagcaaggttaccccccttcacaaagtgctcct
ggacctcagttccccaactacccgcaaggacaaaaccagcagtatgtgcaatacaggcct
acacaaccaggccctccccagccccaacagcagaggccatatgcttatgatcaggctcaa
tatggaaactaccaacaatga
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integrated database retrieval system
