Xenopus laevis (African clawed frog): 380333
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Entry
380333 CDS
T01010
Symbol
fubp1.S, fbp, fbp1, fubp, fubp1, fubp1-a, fubp1-b, FUSE
Name
(RefSeq) far upstream element binding protein 1 S homeolog
KO
K13210
far upstream element-binding protein
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xla03019
]
380333 (fubp1.S)
03041 Spliceosome [BR:
xla03041
]
380333 (fubp1.S)
Messenger RNA biogenesis [BR:
xla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
380333 (fubp1.S)
Spliceosome [BR:
xla03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
380333 (fubp1.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_Vigilin
KH_KhpA-B
SIMPL
Motif
Other DBs
NCBI-GeneID:
380333
NCBI-ProteinID:
NP_001080641
Xenbase:
XB-GENE-6252996
UniProt:
Q7ZXS1
A0A974HLS6
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All DBs
Position
4S:61032308..61052647
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AA seq
653 aa
AA seq
DB search
MADYSTVPPPSSGAGVNDAFKDALQRARQIAAKIGGETGTTINSNDYGFGGQKRPLDDGD
QPEAKKVASTNDSFAPSMPPMHQQQRSVLTEEYKVPDGMVGFIIGRGGEQISRIQQDSGC
KIQIAPDSAGMPDRSCMLTGSPDSVQAAKRLLDQIVEKGRPTPGFHHGEGSGNAVQEIMI
PASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRIAGDPYKVQQAKEMVL
ELIRDQGGFREIRNEYGSRIGANEGIDVPIPRFAVGIVIGRSGEMIKKIQNDAGVRIQFK
PDDGSVPERIAQITGPQDGCQHAAEIINDLLRSVQSGNAGGPGPGGRGRGRGQGNWNMGP
PGGLQEFNFVVPTVKTGLIIGKGGETIKNISQTSGARIELQRNPPPNADPNVKLFTIRGS
PQQIDYARQLVEEKIGGPVNPLGPPVPQGPPGVPGPHGPPGPPGPGTPMGPYNPPPYNPG
PPGPTPHGPPAPYTPQGWSNNYPHWQQPNQPDPSKAATDPNSAAWAAYYAHYYQQQAPQP
PAAPNAAPTTTQTNGQAEPPAAAPPGGQVDYTKAWEEYYKKMGQQGPQQDYTKAWEEYYK
KQGQTVPTPGAAPPAGQPDYSAAWAEYYRQQAAYYAQTSPQGVPQHPPVPQGQ
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggctgattactctaccgtcccaccacccagttccggagccggtgtgaacgatgccttt
aaagacgcccttcagagagcgagacagattgctgctaaaattggaggtgaaacaggaaca
actataaactcaaacgactatggatttggtggacaaaagaggccacttgatgatggagat
caaccggaggccaaaaaagttgcttctacaaatgattcttttgctccatcaatgcctcca
atgcaccagcagcaaaggtctgttcttacagaggaatacaaagttccagatggaatggtg
ggattcattattggcagaggaggggaacagatttctcgcattcagcaggattctggctgc
aaaatacagatcgctccagatagtgcaggcatgcccgataggtcttgtatgctaactggt
tctcctgattctgttcaagctgccaagaggctacttgatcagattgtggaaaaaggaaga
ccaactcctgggtttcatcatggagagggttctggaaatgctgtccaagaaataatgatt
cctgccagtaaagctggattagtaattggaaagggaggagaaaccattaaacaacttcag
gaaagagctggagttaagatggttatgatccaagatggaccccaaaacacaggagctgac
aagcctttaaggattgcaggggatccatacaaagtacagcaagcaaaggagatggtgtta
gaattaattcgtgatcaaggaggtttcagggaaattcggaatgagtatggctcaagaata
ggagcaaatgaaggaatagatgttcctataccacgatttgctgttggaattgtgataggc
agaagtggcgaaatgattaagaaaatacagaatgatgcaggtgttagaatacagtttaaa
ccagatgatggatcagttccagaaaggattgcacagattactggtccccaagacggatgt
caacatgctgctgaaattataaatgacttgctgcgtagtgtccagtcaggaaatgctggt
ggaccagggcctggtggcagagggagaggcagaggacaaggaaactggaatatggggcct
ccaggtggtttacaggaattcaactttgttgttcccacagtgaaaactggcctaataatt
ggaaaaggtggggaaaccattaaaaatataagccaaacgtctggggctaggatagagctg
cagcggaaccccccaccaaatgcagatcccaatgtgaagttatttactatacgtggctct
ccacaacagatagattatgccaggcagctggttgaagagaagattggaggtcctgtaaat
cccttggggcctccagttcctcaaggtccacctggtgttccaggaccgcatggcccacca
ggtcctcctggacctggtactcccatgggaccttacaatccaccaccttataatcctggc
cctccaggacctacaccacatggaccccctgctccatatactcctcaaggatggagcaac
aattatccacactggcaacaaccaaaccagccagacccaagtaaagcagctacagacccg
aattctgcagcatgggcagcttattacgcacactattatcagcagcaagcaccccaaccc
cctgcggctccaaatgctgcaccaactacaacacaaactaatgggcaagctgaacctcca
gctgctgcacccccaggtgggcaagtcgattacacaaaggcttgggaggagtattacaag
aaaatgggtcagcaagggccacaacaagattatacaaaggcatgggaagaatattacaaa
aaacaagggcaaaccgttccaactccaggagctgcaccacctgctggacagccagattac
agtgcagcctgggcagagtattacagacagcaagcggcatattatgctcaaacaagtcca
caaggggtgccacaacatccgccagtgccacagggccaataa
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