Xenopus laevis (African clawed frog): 380369
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Entry
380369 CDS
T01010
Symbol
rfc5.L, rfc5
Name
(RefSeq) replication factor C subunit 5 L homeolog
KO
K10756
replication factor C subunit 3/5
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03030
DNA replication
xla03410
Base excision repair
xla03420
Nucleotide excision repair
xla03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
380369 (rfc5.L)
03410 Base excision repair
380369 (rfc5.L)
03420 Nucleotide excision repair
380369 (rfc5.L)
03430 Mismatch repair
380369 (rfc5.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xla03032
]
380369 (rfc5.L)
03036 Chromosome and associated proteins [BR:
xla03036
]
380369 (rfc5.L)
03400 DNA repair and recombination proteins [BR:
xla03400
]
380369 (rfc5.L)
DNA replication proteins [BR:
xla03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
380369 (rfc5.L)
DNA Replication Termination Factors
ELG1-RFC complex
380369 (rfc5.L)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
380369 (rfc5.L)
DNA repair and recombination proteins [BR:
xla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
380369 (rfc5.L)
Check point factors
HRAD17(Rad24)-RFC complex
380369 (rfc5.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_11
AAA_22
AAA_24
AAA_14
AAA_assoc_2
RuvB_N
AAA_16
ResIII
DEAD
DUF815
PhoH
AAA_7
AAA_5
AAA_19
TIP49
AAA_30
ATPase_2
Mg_chelatase
AAA_2
DNAX_ATPase_lid
Thioredoxin_6
bpMoxR
Motif
Other DBs
NCBI-GeneID:
380369
NCBI-ProteinID:
NP_001080677
Xenbase:
XB-GENE-1016206
UniProt:
Q7ZTM5
A0A974E3A3
LinkDB
All DBs
Position
1L:179248338..179284382
Genome browser
AA seq
335 aa
AA seq
DB search
MVSENKGQPVQSRNLPWVEKYRPQTLDDLISHQDILSTIQRFISEDKLPHLLFYGPPGTG
KTSTILACAKQLYKDREFNSMVLELNASDDRGIDIVRGPILSFASTRTIFKKGFKLVILD
EADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLSSDMMIPR
LEHVVKEERVDISPDGMKALVTLSNGDMRRSLNILQSTNMAYGKVTEDTVYTCTGHPLRS
DIANILDWMLNKDFTSAYKNIMELKTLKGLALHDILTEVHLYVHRVNFPASVRMHLLVKM
ADIEYRLASGTSEKIQLSSLIAAFQVARDMVVAEA
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggtgtccgagaataagggtcaacccgtgcagagcaggaacttgccatgggttgagaaa
taccggcctcagacacttgatgacctgatttcccatcaagacatattgagcacaattcag
agattcatcagcgaagacaaactccctcaccttttattctatggacctcctgggactggg
aagacctctacaattcttgcctgtgcaaagcagctttacaaagatcgagaattcaattct
atggttttagagttgaatgcttcagatgaccggggcatagatattgtcagaggaccgatt
ttaagcttcgcaagcacaagaaccatttttaaaaaaggcttcaagcttgtgatattggat
gaagcagacgcaatgactcaggatgcacagaatgctctgagaagagtgattgagaaattt
acagagaacactcggttctgccttatctgcaattacctctcaaagatcataccagctctg
cagtccaggtgcaccagattccgctttggtcctctgagttccgacatgatgattcctaga
cttgagcatgtcgtaaaggaagagcgtgtagacatcagccctgatggaatgaaagccttg
gtgaccttgtccaatggagacatgcgcagatcactgaatatcttacagagtacaaatatg
gcttatgggaaagtaacagaggatactgtgtatacctgtaccggccatcccctgaggtct
gacatagccaatattctcgactggatgctgaacaaggattttacttcagcttataaaaat
attatggagctgaagacgctgaaaggcctggctcttcatgatattttaactgaagtccat
ctctatgtgcatcgagtgaacttcccagcatcagttcgaatgcacttgttagtcaagatg
gctgatatagagtacagactggcgtctgggacaagtgagaagattcagttgagttctctg
attgcagcttttcaggtggccagagatatggttgttgctgaagcctag
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integrated database retrieval system
