Xenopus laevis (African clawed frog): 380381
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Entry
380381 CDS
T01010
Symbol
hnrnpa1.S, hnrnpa1, hnrpa1
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1 S homeolog
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
380381 (hnrnpa1.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xla03019
]
380381 (hnrnpa1.S)
03041 Spliceosome [BR:
xla03041
]
380381 (hnrnpa1.S)
Messenger RNA biogenesis [BR:
xla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
380381 (hnrnpa1.S)
mRNA cycle factors
Common to processing body (P body) and stress granule
380381 (hnrnpa1.S)
Spliceosome [BR:
xla03041
]
Common components
Common spliceosomal components
hnRNP proteins
380381 (hnrnpa1.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
380381
NCBI-ProteinID:
NP_001080689
Xenbase:
XB-GENE-493967
UniProt:
Q7ZX33
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All DBs
Position
2S:complement(137237656..137243043)
Genome browser
AA seq
399 aa
AA seq
DB search
MHKSEAPKEPEQLRKLFIGGLSFETTDESLREHFEQWGALTDCVVMRDPNSKRSRGFGFV
TYSSTDEVDAAMTARPHKVDGRVVEPKRAVSREDSSRPGAHLTVKKIFVGGIKEDTEEHH
LREYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFEDHDSVDKIVIQKYHTVNNHNCEVRKA
LSKQEMSSVSGSQRGRGGSGNYGGRGGFGNDNFGGRGGNFGGNRGGGFGNRSYGGDGFGN
DGGFGGSPPYSGGNRGYGGSQGGGYGGGSQGGGYGGGGQGGGYGGGGQGGGYGGGQTGGY
GGGQGGGYGGGQGGGYGGGQGGGNGGYDGYNGGGSGSGGNFGGSGGYNDFGNYNNQSSSS
FGPMKGGNYGGGRNSAPYAGGYGGGSGSSSSGYGGGRRF
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgcacaagtccgaggcacccaaggagccagagcaactccgcaagctgttcattggaggc
ctgagttttgaaacaactgacgaaagtcttcgtgagcactttgagcaatggggcgcccta
acagactgtgtggttatgagagatccaaactcaaaacgttcccgtggctttggatttgta
acatactcctcaacagacgaagtagatgctgccatgactgctcggccgcataaggtggat
ggacgagtggttgaacctaaaagggctgtctctagagaagattcttctaggcctggtgca
cacctcaccgttaagaagatctttgtaggtggtataaaggaggacacagaagaacaccat
ttacgagaatattttgagcaatatggcaaaattgaagtcatagagataatgaccgaccga
ggcagtggcaagaaaaggggctttgcatttgtcacatttgaagaccatgattcagttgac
aagattgtcatccagaaatatcacactgtcaacaaccacaactgtgaagtgcgtaaggca
ctctccaaacaggaaatgtcaagtgtttctggcagtcaaagaggacgtggtggctctgga
aactatggtggccgtggagggtttggtaatgacaactttggaggtcgtggtggaaacttt
ggtggcaacagagggggtggatttggtaaccgaagttatggtggagatggctttggcaat
gatggtggttttggtggcagtcctccttactctggtggtaacagaggatatggtggcagc
caaggcggtggatatggtggtggcagccaaggcggtggatatggtggtggcggccaaggc
ggtggatatggtggtggcggccaaggcggtggatatggtggcggccaaactggtggttat
ggtggcggccaaggcggtggatatggtggcggccaaggcggaggatatggtggtggccaa
ggaggtgggaatggaggatacgatggctataatggaggaggcagtggttctgggggtaac
tttggtgggagcgggggatataatgacttcggcaactacaacaatcagtcctcgtccagc
tttggcccaatgaaaggtggaaattatggtggtggcaggaattctgcaccgtatgcaggt
ggctatggcggagggtctggtagcagcagtagcggatatggcggtgggaggaggttttaa
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integrated database retrieval system
