KEGG   Xenopus laevis (African clawed frog): 380406
Entry
380406            CDS       T01010                                 
Symbol
rab5c.L
Name
(RefSeq) ras-related protein Rab-5C
  KO
K07889  Ras-related protein Rab-5C
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla04137  Mitophagy - animal
xla04144  Endocytosis
xla04145  Phagosome
xla04148  Efferocytosis
xla05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:xla00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    380406 (rab5c.L)
   04145 Phagosome
    380406 (rab5c.L)
   04137 Mitophagy - animal
    380406 (rab5c.L)
   04148 Efferocytosis
    380406 (rab5c.L)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    380406 (rab5c.L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:xla04131]
    380406 (rab5c.L)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:xla04147]
    380406 (rab5c.L)
   04031 GTP-binding proteins [BR:xla04031]
    380406 (rab5c.L)
Membrane trafficking [BR:xla04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    380406 (rab5c.L)
 Endosome - Lysosome transport
    380406 (rab5c.L)
Exosome [BR:xla04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   380406 (rab5c.L)
  Exosomal proteins of other body fluids (saliva and urine)
   380406 (rab5c.L)
  Exosomal proteins of colorectal cancer cells
   380406 (rab5c.L)
  Exosomal proteins of bladder cancer cells
   380406 (rab5c.L)
GTP-binding proteins [BR:xla04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    380406 (rab5c.L)
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA RsgA_GTPase AAA_16 MCR_beta
Other DBs
NCBI-GeneID: 380406
NCBI-ProteinID: XP_041431892
Xenbase: XB-GENE-6077704
UniProt: A0A1L8ERL9
LinkDB
Position
9_10L:686910..695682
AA seq 215 aa
MASRGTSARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTETFARAKNWVKELQ
RQASPNIVIALSGNKADLSSKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
KLPKNEPQNTQSTTGRNRGVDLQENNPPSRSQCCN
NT seq 648 nt   +upstreamnt  +downstreamnt
atggccagtagaggaacaagcgctcgacccaatggcccggcagccggcaacaagatctgc
cagttcaaactggttttactgggggagtcggctgtggggaagtcaagtttggtcctgcgc
ttcgtcaagggacagtttcacgagtaccaggaaagcacaatcggagctgcctttctaaca
cagactgtgtgcctggatgatacaacggtgaagtttgagatctgggacaccgcagggcag
gagaggtaccacagtttggcccccatgtactatcgaggagcccaggcggccattgtagtt
tatgacatcaccaatacagaaacgtttgcaagagcaaaaaactgggtaaaagagcttcag
cgccaggcaagtcccaacattgtcattgccttgtctggtaacaaagccgacctctccagt
aagagagccgtggattttcaggaagctcaggcgtacgccgatgacaacagcctgctattt
atggagacctctgctaaaacagcaatgaatgtgaatgaaatctttatggccatcgccaag
aagctgcccaagaacgagccccaaaatacacaaagtaccacagggagaaaccgaggagtg
gacctccaagagaacaaccctccttccaggagtcagtgctgcaactaa

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