Xenopus laevis (African clawed frog): 380406
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Entry
380406 CDS
T01010
Symbol
rab5c.L
Name
(RefSeq) ras-related protein Rab-5C
KO
K07889
Ras-related protein Rab-5C
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04137
Mitophagy - animal
xla04144
Endocytosis
xla04145
Phagosome
xla04148
Efferocytosis
xla05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
380406 (rab5c.L)
04145 Phagosome
380406 (rab5c.L)
04137 Mitophagy - animal
380406 (rab5c.L)
04148 Efferocytosis
380406 (rab5c.L)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
380406 (rab5c.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
380406 (rab5c.L)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xla04147
]
380406 (rab5c.L)
04031 GTP-binding proteins [BR:
xla04031
]
380406 (rab5c.L)
Membrane trafficking [BR:
xla04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
380406 (rab5c.L)
Endosome - Lysosome transport
380406 (rab5c.L)
Exosome [BR:
xla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
380406 (rab5c.L)
Exosomal proteins of other body fluids (saliva and urine)
380406 (rab5c.L)
Exosomal proteins of colorectal cancer cells
380406 (rab5c.L)
Exosomal proteins of bladder cancer cells
380406 (rab5c.L)
GTP-binding proteins [BR:
xla04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
380406 (rab5c.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
GTP_EFTU
Gtr1_RagA
RsgA_GTPase
AAA_16
MCR_beta
Motif
Other DBs
NCBI-GeneID:
380406
NCBI-ProteinID:
XP_041431892
Xenbase:
XB-GENE-6077704
UniProt:
A0A1L8ERL9
LinkDB
All DBs
Position
9_10L:686910..695682
Genome browser
AA seq
215 aa
AA seq
DB search
MASRGTSARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTETFARAKNWVKELQ
RQASPNIVIALSGNKADLSSKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
KLPKNEPQNTQSTTGRNRGVDLQENNPPSRSQCCN
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggccagtagaggaacaagcgctcgacccaatggcccggcagccggcaacaagatctgc
cagttcaaactggttttactgggggagtcggctgtggggaagtcaagtttggtcctgcgc
ttcgtcaagggacagtttcacgagtaccaggaaagcacaatcggagctgcctttctaaca
cagactgtgtgcctggatgatacaacggtgaagtttgagatctgggacaccgcagggcag
gagaggtaccacagtttggcccccatgtactatcgaggagcccaggcggccattgtagtt
tatgacatcaccaatacagaaacgtttgcaagagcaaaaaactgggtaaaagagcttcag
cgccaggcaagtcccaacattgtcattgccttgtctggtaacaaagccgacctctccagt
aagagagccgtggattttcaggaagctcaggcgtacgccgatgacaacagcctgctattt
atggagacctctgctaaaacagcaatgaatgtgaatgaaatctttatggccatcgccaag
aagctgcccaagaacgagccccaaaatacacaaagtaccacagggagaaaccgaggagtg
gacctccaagagaacaaccctccttccaggagtcagtgctgcaactaa
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