Xenopus laevis (African clawed frog): 380409
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Entry
380409 CDS
T01010
Symbol
myo5a.L, Myo5, myo5a
Name
(RefSeq) myosin VA L homeolog
KO
K10357
myosin V
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
380409 (myo5a.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xla03019
]
380409 (myo5a.L)
04131 Membrane trafficking [BR:
xla04131
]
380409 (myo5a.L)
03029 Mitochondrial biogenesis [BR:
xla03029
]
380409 (myo5a.L)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xla04812
]
380409 (myo5a.L)
Messenger RNA biogenesis [BR:
xla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
380409 (myo5a.L)
mRNA cycle factors
P-body specific factors
380409 (myo5a.L)
Membrane trafficking [BR:
xla04131
]
Others
Actin-binding proteins
Myosins
380409 (myo5a.L)
Mitochondrial biogenesis [BR:
xla03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
380409 (myo5a.L)
Cytoskeleton proteins [BR:
xla04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
380409 (myo5a.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Csm1_N
AAA_22
HTH_17
AAA_16
Myosin_N
Motif
Other DBs
NCBI-GeneID:
380409
NCBI-ProteinID:
NP_001346642
Xenbase:
XB-GENE-1004105
UniProt:
A0A8J0QHU3
LinkDB
All DBs
Position
3L:107249970..107351185
Genome browser
AA seq
1827 aa
AA seq
DB search
MENNLDFAYVTHARVWIPDPEEVWKSAEMLKDYKPGDTVLRLRLEEGTDLEYRLDAKTKE
LPPLRNPDILVGENDLTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYEQLPI
YGTDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMR
YFATVSGSASETNVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRILGAH
MRTYLLEKSRVVFQAEEERNYHIFYQLCASASLPEFKMLRLGTANDFHYTKQGGSPVIDG
VDDQKEMRNTRQACTLLGIGESYQMGIFRILAAILHLGNVEFKSRDSDSCLIPPKHVPLT
IFCDLMGVDYEEMSHWLCHRKLVTAAETYIKPISRLQATNARDALAKHIYAFLFNWIVCH
VNKALLSSTKQNSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNLHVFKLEQEEYM
KEQIPWTLIDFYDNQPCINLIEAKMGILDLLDEECKMPKGSDSTWAQKLYNTHLKKCALF
EKPRLSNVAFIIKHFADKVEYQCDGFLEKNKDTVFEEQIKVLKASKFTLLTELFQDEERI
LSPTSSAPPSGRTLLSRTSLRSLKPKPDQTSKEHKKTVGHQFRNSLHLLMETLNATTPHY
VRCVKPNDFKYPFTFDSKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQK
DVLSDWKQTCRNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEKIRADKLRMACIRIQKTI
RGWLLRKKYLRMRKAAITIQRYVRGYQARCYAQFLRRTRAAIIIQKFQRMYVVRQKYRHI
QSFTLALQSYLRGYAARKRYQEILRAHKATIIQKHVRGWLARVTYKRNLSAIVYLQCCYR
RMMAKRELKKLKIEARSVEHFKKLNVGMENKIMQLQCKVNDQNKDNKSLLERLTHLEVTY
NADKDKLRNDVDRLRHFEEEAKNAANRMVSLQDELARLRKELLQTQTEKNNIKERAEKYQ
TETDRLVAELREQNALLKTEKEKLNLLIQEQARKMTEDMEKKIIEETKQLELELNDERLR
YQNLLNEYSRLEERYDDLKDEMNTMSPPKPGHKRTDSTHSSNESEYTFSSEITESEDFPY
RNEEPADRKTPLDMSLFLKLQKRVKELEQEKQLMQDDLDKKEEQIIRAKILEEAKTPTRG
TELEYESLKRQELESENKKLKNELNELRKAITEKASPDAKGPGGNVYHILLEQMTSVSEE
LDVRKEEVLILRSQLVSQMEAIPHKDTMTDSMVLSEDVQKMKDKREIAQAYTGMKETNRV
LESQLQSQKKAFENEVEALRGEIQALKEENNRQQQLLAQNLQLPPEARIEASLQHEITRL
TNENLDLMEQLEKQDKTVRKLKKQLKVFAKKIGELEVGQMENVSPGQIVDEPIRPVNIPR
KEKDFQGMLEYKKEDELKLVKNLILELKPRGVAVNLIPGLPAYILFMCLRHADYLNDDQK
VRSLLTSTINGVKKILKKRGDDFETVSFWLSNTCRFLHCLKQYSGEEGFMKHNSPRQNEH
CLTNFDLAEYRQVLSDLAIQIYQQLVRVLENILQPMIVSGMLEHETIQGVSGVKPTGLRK
RTSSIADEGTYTLDSIVRQLNTFHSIMCQHGMDPELIKQVVKQMFYIIGAVTLNNLLLRK
DMCSWSKGMQIRYNVSQLEEWLRDKNLMNSSAKETLEPLIQAAQLLQVKKKTDEDAEAIC
SMCNALTTAQIVKVLNLYTPVNEFEERVLVSFIRNIQMRFRDRKDSPQLLMDAKHIFPVT
FPFNPSSLALETIQIPGSLGLGFLTRV
NT seq
5484 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacaatttagattttgcttatgttacacacgcaagggtctggatccctgaccct
gaggaagtatggaaatctgcagagatgctcaaggactacaagcctggagacactgttctt
cggttacgtctggaggaaggcacggatttggaatatcgcctcgatgccaagacaaaggaa
ctcccccctctgagaaacccagacatccttgtgggagagaatgacctcacagccctgagt
tatctccacgagccagccgttctccacaatttgaaagtacgatttatagactccaaactc
atttatacatactgcggcattgttctcgtagctataaacccctatgagcagttacccatc
tatggcaccgacatcattaatgcgtacagtgggcagaatatgggggacatggatccccat
atttttgcagtggcagaagaagcatataaacaaatggccagggatgagcgcaatcagtcg
attattgtgagtggagaatctggagctgggaagactgtctctgccaagtatgctatgaga
tactttgcaactgtcagtggttctgccagtgaaacaaacgttgaagagaaagtgttggcc
tccaatcccatcatggagtctataggtaatgctaaaaccacaaggaatgataacagcagt
cgctttggcaaatacattgaaattggctttgataaacgctacaggattcttggtgcccac
atgagaacctatttgctggagaaatctagagtggtgtttcaggctgaagaagagaggaat
tatcacatcttttatcagctttgtgcatctgcttctttacctgagttcaagatgcttcga
ctgggcactgccaatgatttccattacacaaagcaaggaggcagtcctgtgattgatgga
gttgatgaccagaaggaaatgagaaacaccaggcaagcttgcaccttactaggaattgga
gagtcatatcaaatgggaattttcaggattttagctgctatacttcacctggggaatgta
gaatttaaatctcgggattcagatagctgtttaatcccaccaaaacacgtaccccttact
atattttgtgatctgatgggtgtggattatgaagagatgtctcattggctgtgtcacagg
aagcttgttactgctgctgagacctacatcaagcccatttccagattacaagccaccaat
gccagagatgccctggctaaacacatctatgctttcttatttaactggattgtgtgtcat
gtcaacaaagctcttctttcctcaacaaagcagaattcgtttattggagtcctggatata
tacgggtttgaaacctttgaaatcaacagctttgaacagttttgtatcaactatgcgaat
gagaaactccagcaacagtttaatttgcatgttttcaagttggagcaagaagaatatatg
aaggagcaaattccatggacattaattgatttttatgataaccagccttgtatcaatctc
attgaggcaaaaatgggtattctggatcttcttgatgaagaatgcaagatgcccaaaggc
tcagacagcacatgggcacagaagttatacaatactcatcttaagaaatgtgcattattt
gaaaagccgcgtctgtctaatgtggcttttattattaaacactttgccgacaaggtagag
tatcagtgtgatggttttctggaaaagaacaaagatacagtatttgaagaacaaattaaa
gtactgaaagcaagtaagtttacactgctaacagagttgttccaagatgaggagcggatc
ttgagccctacatcttctgcaccgccctcaggtcgtactctgctatcccgcactagtttg
cgctccctgaagcccaagcctgaccagacaagcaaggagcataaaaaaactgtcggccat
cagttcagaaattcccttcaccttctgatggagactctcaatgccacaaccccacactat
gtgcgttgcgttaagccaaatgacttcaagtaccccttcacatttgactctaaacgagca
gtgcagcagcttagggcttgcggagtattggaaaccatccgaatcagcgcagctggattt
ccttcaaggtggacatatcaggaattttttagcagataccgtgttttaatgaagcaaaaa
gatgtcctcagtgattggaagcaaacctgcagaaatgttctggagaagcttattttggac
aaggataagtaccagtttggtaagacaaagatcttcttccgtgctggccaagtggcctat
ctggaaaagatcagagcagacaagctgagaatggcctgtattagaatccagaagacaatc
cgaggatggcttttgaggaagaaatacttgcgtatgaggaaagcagccataacaatccag
cgatatgtcaggggataccaggcacgatgttacgcacagtttcttcgtagaacaagggcg
gcgattattatccagaaattccaaaggatgtatgttgttcgacagaagtaccggcatata
cagtcctttacgcttgctctccagtcgtatctgcgtggttatgcagccaggaagagatat
caggagattcttcgagcacacaaagctaccattattcagaagcatgtgcgtggctggtta
gcccgtgtcacttataagagaaatttaagtgctatcgtatacctgcagtgttgttaccgc
aggatgatggccaaaagggagctgaagaaattaaagatcgaggcacggtcagtggaacac
ttcaagaaactcaacgttgggatggagaacaagatcatgcagttgcagtgtaaagtcaat
gatcagaataaagacaacaaatccttgctggagaggctaacacacttggaggtcacatac
aatgcagacaaagataagctaagaaatgatgttgacagactgcgccatttcgaggaggag
gccaaaaatgcagcaaacagaatggtcagcttgcaggacgagcttgccaggcttaggaaa
gagctgctgcaaacacagactgaaaagaacaacattaaggaacgggcagagaaatatcag
acagagactgaccggcttgttgccgagctgagagaacagaatgctttgctgaagactgag
aaagaaaaactgaatcttttaatccaggagcaggcaagaaaaatgacagaggatatggaa
aagaaaattatagaagaaacaaagcagttggagcttgagctgaatgatgaacgactaagg
taccagaatctcctcaatgagtacagccgtctggaggagcgatatgatgaccttaaagat
gaaatgaataccatgagtcctccaaagccaggacacaagcgcaccgactctactcatagc
agcaatgaatctgaatacacttttagctcggaaatcacggagtcggaagacttcccatac
cgaaatgaggagcctgctgacagaaaaacaccactggacatgtctctgttccttaagctt
cagaaacgggtcaaggagcttgagcaggaaaagcaactgatgcaagatgatttggataag
aaggaggaacagataatccgagctaaaatattggaggaggcaaagaccccaaccagaggt
acagaactggagtatgaatcactcaagcgtcaagaactggaatctgagaacaaaaagctg
aagaatgagttgaatgagctgcgcaaggcaatcactgagaaagcttccccagatgcaaaa
gggcctggtggaaatgtctatcacattctcttagagcagatgacatctgtaagtgaggaa
cttgacgtgcgtaaggaagaagtccttatactgaggtcccagctagtgagccaaatggaa
gccattccacacaaggacacaatgactgattccatggtcctctctgaggatgtacagaag
atgaaggataaaagggaaattgctcaggcatatactggcatgaaggagacaaatagggtt
ttggagtcccagctgcaatcacagaaaaaggcctttgaaaatgaagtggaagctctaaga
ggtgaaatccaggctctaaaggaggagaacaaccgacagcagcagcttttagctcagaac
ctccagttgccacctgaagcaagaattgaagccagcttgcagcatgaaatcaccaggctt
accaatgagaacttggatctgatggagcaacttgaaaaacaagataagactgtacgcaaa
ctaaaaaagcagttgaaagtctttgccaagaaaattggggagctggaagtgggtcaaatg
gaaaatgtttctcctggtcagatagtggatgaacccattcgtcctgttaatattccacgc
aaagagaaagacttccaaggaatgctggaatataagaaagaggatgaattaaaactcgtc
aagaacctcattttagaactgaagcctcgaggtgtagcggtcaaccttatcccaggactg
ccggcatatattttgttcatgtgtttgcgtcatgccgattacctcaatgatgatcagaaa
gttcgctccctgctcacatcaactattaatggtgtcaagaaaatcttaaagaaaagagga
gacgattttgagacggtgtccttctggctgtccaatacatgccggttcctccattgctta
aagcagtacagtggagaggagggatttatgaagcacaactccccacggcagaatgagcac
tgtctgaccaattttgaccttgcagaatacagacaagtcttgagtgacctggccattcag
atttaccagcagttggtcagagtgctggaaaacatcttgcagcccatgattgtttcagga
atgctggagcacgagactattcagggtgtgtctggagtcaagcctaccggtctgaggaag
agaacttccagtatagcagatgagggaacctacacattagattctattgtcaggcagctg
aataccttccattccataatgtgtcagcatggaatggatcctgaacttatcaagcaggtg
gtcaagcaaatgttctacatcattggtgccgtcacactcaacaacttgctcttgcgaaag
gatatgtgctcttggagcaaaggaatgcagataaggtacaatgtgagccagttggaagaa
tggctgcgtgacaagaacctgatgaatagcagcgctaaagaaaccctggagccattaatt
caggctgctcagttactgcaggtgaaaaagaaaaccgatgaagatgcagaagccatctgc
tccatgtgcaatgctctgactactgctcagattgtcaaggtgttgaacctgtacactcca
gtgaatgagtttgaagagagggtgttggtatcatttataaggaatatacagatgcgtttc
agagataggaaggattcccctcagctgcttatggatgctaaacacatcttccctgtcacc
ttcccattcaacccttcatcgcttgccctagaaactattcaaattcctgggagtcttgga
cttgggttcctcacacgcgtctga
DBGET
integrated database retrieval system
