Xenopus laevis (African clawed frog): 380454
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Entry
380454 CDS
T01010
Symbol
abce1.S, abce1
Name
(RefSeq) ATP binding cassette subfamily E member 1 S homeolog
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xla03009
]
380454 (abce1.S)
Ribosome biogenesis [BR:
xla03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
380454 (abce1.S)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
Fer4_RLI
AAA_21
SMC_N
Fer4
AAA_22
AAA
AAA_15
Fer4_6
AAA_29
AAA_16
RsgA_GTPase
NACHT
nSTAND3
Fer4_2
AAA_30
Fer4_10
SRP54
AAA_23
TsaE
ORC-CDC6-like
LdpA_Fe-S-bd
Fer4_21
Fer4_9
Fer4_4
AAA_19
NPHP3_N
Fer4_7
Fer4_8
Fer4_16
UDG-inhib_P56
Motif
Other DBs
NCBI-GeneID:
380454
NCBI-ProteinID:
NP_001080761
Xenbase:
XB-GENE-993994
UniProt:
Q7ZWZ3
A0A8J0PR17
LinkDB
All DBs
Position
1S:47726607..47740621
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AA seq
599 aa
AA seq
DB search
MADKLTRIAIVSHDKCKPKKCRQECKKSCPVVRMGKLCIEVTPQSKIAWISETLCIGCGI
CVKKCPFVALSIVNLPSNLEKETTHRYCANAFKLHRLPIPRPGEVLGLVGTNGIGKSTAL
KILAGKQKPNLGKYDDPPDWQEILTYFRGSELQNYFTKILEDDLKAIIKPQYVDQIPKAA
KGPVGTILDRKDETKTQITVCDQLDLTHLRDRNVEDLSGGELQRFACAVVCIQRADIFMF
DEPSSYLDVKQRLKAAITIRSLINPDSYIIVVEHDLSVLDYLSDFICCLYGVPSVYGVVT
MPFSVREGINIFLDGYVPTENLRFRDTSLVFKVAETANEEDIKKMCMYKYPCMRKLLGDF
QLRIVAGEFTDSEIMVMLGENGTGKTTFIRMLAGRLKPDEGGDVPVLNVSYKPQKISPKA
SGSVRQLLHEKIRDAYTHPQFVTDVMKPMQIESIIDQEVQSLSGGELQRVALTLCLGKAA
DVYLIDEPSAYLDSEQRLTAARVIKRFILHAKRTAFIVEHDFIMATYLADRVIVFDGIPS
KDTVANRPQTLLAGMNKFLSQLEITFRRDPNNYRPRINKMNSIKDVDQKKSGNYFFLDD
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaaacttaccagaatagctatagttagtcatgacaaatgcaagccaaagaaa
tgccgccaagaatgcaaaaagagttgtcctgttgtgaggatgggaaaattgtgcattgaa
gtgacaccacaaagtaaaattgcatggatttctgaaaccttgtgcattggatgtggtatt
tgtgtcaagaaatgtccttttgtggcattgtcaattgtcaacttgccgagcaatctggag
aaagagacaacgcacagatattgtgccaatgcctttaagcttcacaggttgcctattccc
cgacctggagaagtacttggattggttggtaccaatggtatcggaaaatctacagcattg
aaaattttggctggaaagcaaaagccaaaccttggaaagtatgatgaccctccagattgg
caggagatcttgacctatttcaggggttcagagttgcagaactacttcaccaagattttg
gaggatgacctgaaggccatcattaaacctcagtatgtggaccaaattccaaaagctgca
aagggacccgtgggtaccatattggatagaaaagatgaaacaaagacacagattactgtc
tgtgaccaactagaccttactcatctgagagacagaaacgtggaggatctttctggggga
gagctgcagaggtttgcttgtgctgttgtctgtatccagagagccgacatatttatgttt
gatgagccatctagttatttagatgtcaagcaacgccttaaggctgccattaccatcaga
tctctgattaatccagatagctacatcattgttgtggagcatgatctcagtgtgttggat
tatctctccgacttcatttgctgcttgtatggtgtcccaagtgtatatggtgtggtaact
atgcctttcagcgtccgagaaggcataaacattttcttggatggctacgttcctactgaa
aacttaaggtttagagacacctctctggtttttaaagtggccgagactgccaatgaagaa
gatattaaaaaaatgtgcatgtataagtacccctgcatgaggaaattgctgggagatttc
caactgcggattgttgctggggagtttacagactctgaaatcatggtcatgcttggagag
aatgggactggaaaaaccacctttatccgaatgcttgctgggaggctaaaacccgatgaa
ggaggtgacgttcctgttcttaatgtgagttataagccacagaagatcagccccaaagca
tcaggaagtgttcgccaattgctgcatgaaaagatcagagacgcctacactcatccacag
tttgtgacagatgtgatgaagccaatgcagattgaaagtataattgatcaggaggtgcaa
tctttgtccggtggtgagttacagagggtggccttaactctgtgtttaggtaaagctgcg
gatgtctacctaattgacgagccatcggcgtatctggattctgaacagcgtctcacagct
gccagagtaatcaaaagatttatactccacgccaagaggactgcctttattgtggagcac
gattttataatggctacatatcttgctgacagagtcattgtatttgatggtatcccttcc
aaagatactgttgctaaccgccctcaaacactattggctggcatgaacaagttcttgtca
cagctggaaatcacatttaggagagatcccaacaactacagaccaagaataaacaaaatg
aattctattaaggatgtggatcagaagaagagtggcaactactttttcttagatgactaa
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