Xenopus laevis (African clawed frog): 380469
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Entry
380469 CDS
T01010
Symbol
rbm22.S, cg14641, rbm22
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
380469 (rbm22.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xla03041
]
380469 (rbm22.S)
Spliceosome [BR:
xla03041
]
Complex B
Other components
Prp19-related factors
380469 (rbm22.S)
Complex C
380469 (rbm22.S)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
Torus
zf_CCCH_4
Nup35_RRM_2
RRM_occluded
zf-CCCH_2
zf-CCCH
RRM_3
zf-CCCH_4
RRM_YTH1
zf-CCCH_3
zf-CCCH_10
RRM_PARP14_3
zf-CCCH_12
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
380469
NCBI-ProteinID:
NP_001080776
Xenbase:
XB-GENE-971204
UniProt:
Q7ZXB5
A0A974CKB3
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All DBs
Position
6S:complement(75175115..75188573)
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AA seq
417 aa
AA seq
DB search
MATSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPG
VRMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQVRDTGVSLKDEMPRSDVNKEYYTQN
MEREIANSDGTRPVGALGKATSSSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRFYGINDPVADKLLKRASTMPRLDPPEDKSITTLYVGGLG
DTISESELRNHFYQFGEIRTITVVQRQQCAFIQFATRQSAETAAEKSFNKLIVNGRRLNV
KWGRSQAARGKEREHDGSGDPGMKFEPVPGLPGALPPPPTEEESSANYFNLPPNGSAALV
NISLPPPPGLSGPPPGFGPHMFPPMAPPPFLRAPGHIHYPSQDPQRMGAHAGKPSSG
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtcgctcggatcaaacacgtacaatcggcaaaactgggaagacgcggacttt
cccattctgtgtcagacatgtcttggcgaaaatccatacatcaggatgaccaaagaaaaa
tatggaaaggagtgcaagatttgtgctcgtccattcactgtttttcgctggtgtcctggt
gttcgaatgcgctttaagaagacagaagtgtgccaaacatgcagcaagttgaaaaatgtc
tgtcagacctgcttgcttgaccttgaatatggactgccaattcaagtacgagatactggg
gtatccctaaaagatgagatgcctagatctgatgtgaataaagaatattacactcagaac
atggaaagagagattgcaaactctgatgggacaagacctgttggagctctgggcaaagct
acatctagcagtgacatgctgctaaaacttgctcgcaccaccccttactacaaacgcaac
cgaccacatatctgttctttctgggtgaaaggagagtgtaaaagaggagaggaatgtcca
tacaggcatgagaaacccactgatcctgatgatcccctcgcagaccagaatattaaagac
cgtttctatggtattaatgaccctgtcgcagacaaattattgaaaagggcctccacaatg
cctcgtctggatccaccagaggacaagagcatcacaactctttatgttgggggtttggga
gacaccatcagtgaatcagaactccggaatcatttctaccagtttggtgaaataagaaca
attactgtagttcaaaggcagcaatgcgcatttattcagtttgccactagacagtcagca
gagacggcagcagagaaatcctttaacaagttaattgtgaatggacgtcgactcaatgtg
aagtggggaaggtctcaggcagcccgaggcaaagagagggaacatgatgggtccggtgat
cctggaatgaaatttgagcctgttcctggacttcctggagccctgccacccccaccaaca
gaagaagaatcttcagccaactactttaacctgcctcctaatgggtcagcagctctcgtg
aacatttccctcccacctccacctggcttaagtgggccacctccaggatttggcccacac
atgttcccacctatggcacctcctccattccttcgtgctcctgggcatatccactatcca
tctcaagaccctcaacggatgggagcacatgcaggaaaacctagtagtggttaa
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