Xenopus laevis (African clawed frog): 380478
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Entry
380478 CDS
T01010
Symbol
vps28.S, vps28
Name
(RefSeq) vacuolar protein sorting 28 homolog S homeolog
KO
K12184
ESCRT-I complex subunit VPS28
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
380478 (vps28.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
380478 (vps28.S)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xla04147
]
380478 (vps28.S)
Membrane trafficking [BR:
xla04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
380478 (vps28.S)
Exosome [BR:
xla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
380478 (vps28.S)
Exosomal proteins of other body fluids (saliva and urine)
380478 (vps28.S)
Exosomal proteins of colorectal cancer cells
380478 (vps28.S)
Exosomal proteins of bladder cancer cells
380478 (vps28.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS28
DAHL
Motif
Other DBs
NCBI-GeneID:
380478
NCBI-ProteinID:
NP_001080785
Xenbase:
XB-GENE-6253611
UniProt:
Q7T0W4
A0A974DI89
Structure
PDB
PDBj
LinkDB
All DBs
Position
2S:complement(29617520..29629928)
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AA seq
221 aa
AA seq
DB search
MFHGIPAPANIGAPGNKPELYEEVKLYKNAREREKYDNMAELFAVVKTLQALEKAYIKDC
VSPSEYTAACSRLLVQYKAAFKQVQGAEVGSIDDFCRKYRLDCPLAMERIKEDRPITIKD
DKGNLNRCIADIVSLFITVMDKLRLEIRAMDEIQPDLRELMETMNRMSHLPPDFEGREKV
SQWLQKLSSMSASDELDDSQVRQMLFDLESAYNAFNRFLHS
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgttccatggaattccagcaccagccaacattggagctcctggaaataaaccagaattg
tatgaggaagtgaagttgtacaagaatgcacgggaaagagagaagtatgataacatggca
gaactgtttgcagttgttaagaccctgcaggccctagagaaggcgtacatcaaggactgt
gtctcccccagcgaatacacagcagcctgctctcgccttctggtccagtacaaagctgcc
ttcaaacaggtgcaaggggccgaggttgggtccattgatgatttctgccggaaatacagg
ctcgactgccctctggccatggaaaggattaaggaggatcggccaatcaccatcaaggat
gataaagggaatctgaaccgctgcattgctgacattgtatctctcttcatcactgtcatg
gacaaactgcgcctggagatccgagccatggatgagatccagcctgatttgcgggagcta
atggaaaccatgaacaggatgagccacctcccaccagattttgagggacgggagaaagtg
agtcagtggttacagaagctcagcagtatgtcagcctccgatgaactggatgattctcaa
gtgcgacaaatgctcttcgatttagaatctgcctacaatgccttcaatcgtttcctccat
tcctaa
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integrated database retrieval system
