Xenopus laevis (African clawed frog): 380491
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Entry
380491 CDS
T01010
Symbol
vcp.S, vcp
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04137
Mitophagy - animal
xla04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
380491 (vcp.S)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
380491 (vcp.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xla03019
]
380491 (vcp.S)
03009 Ribosome biogenesis [BR:
xla03009
]
380491 (vcp.S)
04131 Membrane trafficking [BR:
xla04131
]
380491 (vcp.S)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xla04147
]
380491 (vcp.S)
Messenger RNA biogenesis [BR:
xla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
380491 (vcp.S)
Ribosome biogenesis [BR:
xla03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
380491 (vcp.S)
Membrane trafficking [BR:
xla04131
]
SNARE
SNARE associated proteins
Others
380491 (vcp.S)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
380491 (vcp.S)
Exosome [BR:
xla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
380491 (vcp.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
TIP49
AAA_22
AAA_14
NPHP3_N
RNA_helicase
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
Vps4_C
IstB_IS21
ATPase_2
AAA_18
AAA_7
ATPase
ABC_tran
DUF815
AAA_24
NB-ARC
TsaE
ResIII
Sigma54_activat
NACHT
Viral_helicase1
SLFN-g3_helicase
KAP_NTPase
Zot
Motif
Other DBs
NCBI-GeneID:
380491
NCBI-ProteinID:
NP_001095217
Xenbase:
XB-GENE-969578
UniProt:
P23787
LinkDB
All DBs
Position
1S:complement(199772085..199785649)
Genome browser
AA seq
805 aa
AA seq
DB search
MASGSDTKSDDLSTAILKQKSRPNRLIVDESINEDNSVVSLSQAKMDELQLFRGDTVLLK
GKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRVHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDSTGRLEILQIHTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWGLSQSNPSALRETVVEVPQVTWEDIG
GLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRV
INQILTEMDGMSIKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRMAILKAN
LRKSPVAKDVDVDFLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERDRQTNPSAM
EVEEDDPVPEIRRDHFEEAMRLARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPAGGQSG
AGPSPGAGGGSGGGHFTEEDDDLYG
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggcttccggatcagataccaaatccgatgacttgtctacagcaatcctgaagcaaaag
agccggcccaatcggctaattgtggatgaatccatcaatgaggacaacagtgtggtgtcg
ctgtctcaggccaagatggatgagctgcagctctttagaggagacacggtcctgctgaag
gggaagaagaggagagaagccgtttgcatcgttctctcagacgacacctgctctgatgaa
aagatccgcatgaacagagttgtccgtaataacctgagggtgcggctcggagatgttatc
agcattcagccctgcccagatgtgaagtatggcaagcgagtccatgttctgcccatagac
gacacagtggagggcatcactgggaacctgtttgaggtgtatctcaagccttacttcctg
gaagcgtacagaccaatcaggaaaggtgacattttcctggtacgtggagggatgagagcc
gtggagttcaaagtggtggagacggatccttccccatactgcattgtggccccagatacc
gtaatccattgtgaaggggagccaattaagcgtgaggatgaggaggagtccttgaatgaa
gtgggctatgacgacattgggggctgcaggaaacaactggctcagatcaaagagatggtg
gaactgcctctcaggcacccggccctctttaaggctattggagtaaagcctcccagggga
attctgctgtatggacccccaggcactgggaaaaccctcattgctagagctgtggccaat
gaaaccggagctttcttcttcctgattaatggaccggagatcatgagcaagctggcgggt
gagtctgagagtaacctgcgcaaagcttttgaggaggctgagaagaatgcccctgccatt
atctttatagacgagctggatgccattgctcctaaaagagagaagacacacggagaagtt
gaacgccgtattgtgtcccagctactaacactcatggatgggctcaaacaacgcgcacac
gtcattgtcatggcagccaccaaccgacccaacagcattgacccagcgcttaggagattt
ggtcgttttgacagggaggttgatatcggaatccccgactccaccggacgcctggaaatc
ctgcagattcacacgaagaacatgaagctttctgatgatgtggatctggaacaggttgct
aatgaaacccacggacatgtaggtgctgatttggctgctctgtgctcagaagctgctctc
caggccatcaggaagaagatggacctcatagacctggaagatgaaaccatagatgctgaa
gtgatgaattctttggctgtcactatggatgacttcaggtgggggcttagtcagagtaac
ccctcggctctacgagagaccgttgtggaggtgccgcaggtcacatgggaggatattggg
ggtttggaagacgtcaagagggagctccaggagctggttcagtatcctgtggagcatcca
gacaagttcctgaagttcggaatgactccatcaaagggtgtcctattctatggtccacct
ggttgtggtaagactttgctggctaaggccattgccaacgaatgccaggccaacttcatc
tccatcaaagggcccgaacttctcactatgtggtttggagagtctgaggccaacgtccga
gagatatttgataaggctcggcaggctgctccctgtgtcctcttctttgatgaattggac
tccatcgctaaggctcgaggtgggaacattggagacgggggtggagctgctgacagagtt
attaaccagatccttactgagatggacggaatgtctataaagaagaatgtcttcatcatc
ggagccacaaacagaccagatatcattgaccccgccatcctgcgtcctggccgtctagat
cagctcatttacatcccgctgcccgatgagaagtctcgtatggccatcctgaaggccaac
ctgaggaagtctccagttgccaaggatgtggacgtggacttcctggccaagatgaccaat
ggtttctccggagccgatctgactgagatttgccagcgagcctgtaaactggccatcagg
gaatctattgagaatgagatcagacgagagcgggacaggcagactaacccctccgctatg
gaagtggaagaagacgaccccgtaccggaaatccgcagagatcactttgaagaggccatg
cgattggcccgccgctcagtcagcgataacgatatccgcaaatacgagatgttcgcacaa
actcttcagcagagcagaggattcggcagcttcagatttcccgctgggggacaaagtgga
gcgggtccaagcccaggagccgggggaggcagtggcgggggccatttcactgaagaagac
gacgatctctatggttaa
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