Xenopus laevis (African clawed frog): 380513
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Entry
380513 CDS
T01010
Symbol
prim1.S, dnapol-alpha50, p49, prim1
Name
(RefSeq) DNA primase subunit 1 S homeolog
KO
K02684
DNA primase small subunit [EC:
2.7.7.102
]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
380513 (prim1.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xla03032
]
380513 (prim1.S)
Enzymes [BR:
xla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.102 DNA primase AEP
380513 (prim1.S)
DNA replication proteins [BR:
xla03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
380513 (prim1.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_primase_S
Motif
Other DBs
NCBI-GeneID:
380513
NCBI-ProteinID:
NP_001080819
Xenbase:
XB-GENE-969081
UniProt:
Q800A4
A0A974HWK0
Structure
PDB
PDBj
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All DBs
Position
2S:complement(130430997..130446083)
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AA seq
420 aa
AA seq
DB search
MDLSVYDPASLPDVLPLYYRRLFPFYQYFRWLNYGGVVKNYFQHREFSFTLKDDVYVRYQ
SFNNQSELEKEMQKMCPYKIDIGAVYSHRPSLHNTVKSGTFQAQEKELVFDIDMTDYDDV
RRCCSSADICPKCWTLMTIAVRILDRALAEDFGFKHRLWVYSGRRGVHCWVCDDSARKLS
QAERSAVAEYLSVVKGGEETIKKVQLPETIHPFIGKSLKMVERYFEKYALVDQDILENKQ
CWDKVIALVPEVARESLLREFSKARSSVERWDKLSSCLEATGKDFRRYSNIPKEIMLQFC
YPRLDVNVSKGLNHLLKSPFSVHPKTGRISVPIDCKKLDQFDPFSVPTISLICSELDNVS
KKEEDEDSAGEGEPEAKKRTRDYKRTSLAPYIKVFEQFLDKLDQSRKGELLNKSDLKKEF
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggatttgtcggtgtatgatccggccagtttacctgatgtcttgccgctctattacagg
agactcttccccttctatcagtatttccgatggctcaactacggaggcgttgtaaagaat
tattttcaacaccgggagtttagctttacattgaaagatgatgtatacgtgcgataccag
tccttcaacaatcaaagtgaactagaaaaagagatgcagaaaatgtgcccatacaaaata
gatattggggcggtgtactcgcacaggccaagcttacacaacactgtgaaatcgggaact
ttccaagcacaggagaaggagctggtatttgatatagacatgaccgattatgacgatgtc
cggaggtgttgcagttctgcggatatatgcccaaaatgctggactctaatgaccattgca
gttcgaattctagacagagcattggcagaggattttggattcaagcaccgtttgtgggtc
tactcaggcagaagaggagttcattgctgggtgtgtgatgactctgcgaggaagctttcc
caagctgaaaggtcggcagtcgctgaatatctgagcgttgtgaagggtggagaagaaaca
ataaagaaagtccagctccctgaaacaattcatccattcatagggaagtctctgaaaatg
gtggaaagatactttgagaaatatgccttggtggaccaagacatcctagagaacaaacag
tgctgggataaagtaattgcactggttcctgaagttgcccgtgaaagcttgctgcgagaa
ttttcaaaagcacgttcttctgttgaacgttgggataaactctcaagctgtctagaagcc
acagggaaggatttcaggagatacagtaatatacccaaggaaatcatgttacagttctgt
tatcccagactggatgtgaatgtcagcaagggacttaatcacctgttgaaaagcccattc
agtgtacacccaaaaacagggcgaatttccgttcccatagactgtaaaaagctagaccag
tttgacccattttcagtaccaacaataagtttaatatgcagtgaacttgacaatgtttcc
aaaaaggaggaggatgaagatagcgctggtgaaggagaacctgaagcgaagaaacgaaca
cgagattacaagagaaccagcttggcaccttatattaaggtttttgagcaattcctggat
aaactggaccagtcaaggaaaggggaacttctgaacaaaagtgatctgaagaaagaattt
taa
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