Xenopus laevis (African clawed frog): 380595
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Entry
380595 CDS
T01010
Symbol
snrpf.S, snrpf
Name
(RefSeq) small nuclear ribonucleoprotein F
KO
K11098
small nuclear ribonucleoprotein F
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
380595 (snrpf.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xla03019
]
380595 (snrpf.S)
03041 Spliceosome [BR:
xla03041
]
380595 (snrpf.S)
03032 DNA replication proteins [BR:
xla03032
]
380595 (snrpf.S)
Messenger RNA biogenesis [BR:
xla03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
380595 (snrpf.S)
Spliceosome [BR:
xla03041
]
Complex A
U1 snRNP components
Sm proteins
380595 (snrpf.S)
U2 snRNP components
380595 (snrpf.S)
Complex B
U1 snRNP components
380595 (snrpf.S)
U4/U6.U5 tri-snRNP components
380595 (snrpf.S)
Complex C
U2 snRNP components
380595 (snrpf.S)
DNA replication proteins [BR:
xla03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
380595 (snrpf.S)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
380595
NCBI-ProteinID:
NP_001080901
Xenbase:
XB-GENE-1188432
UniProt:
P62321
A0ABE4MG62
LinkDB
All DBs
Position
3S:complement(90679704..90683223)
Genome browser
AA seq
86 aa
AA seq
DB search
MSLPLNPKPFLNGLTGKPVMVKLKWGMEYKGYLVSVDGYMNMQLANTEEYIDGALSGHLG
EVLIRCNNVLYIRGVEEEEEDGEMRE
NT seq
261 nt
NT seq
+upstream
nt +downstream
nt
atgagtttaccactgaatcccaaacctttccttaatggcctcactggtaagccagttatg
gtaaagctgaaatgggggatggagtacaaagggtatctggtatcagtggatggatacatg
aatatgcagcttgcaaacacagaagaatacattgacggtgcgttgtctggacatcttgga
gaagttttaataagatgcaacaatgtattatatatacgtggggtagaagaagaggaggaa
gatggagagatgagagagtaa
DBGET
integrated database retrieval system
