Xenopus laevis (African clawed frog): 387282
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Entry
387282 CDS
T01010
Symbol
tubgcp6.L, grip210, tubgcp6, Xgrip195, Xgrip210
Name
(RefSeq) tubulin gamma complex associated protein 6 L homeolog
KO
K16573
gamma-tubulin complex component 6
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xla03036
]
387282 (tubgcp6.L)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xla04812
]
387282 (tubgcp6.L)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
gamma-tubulin ring complex
387282 (tubgcp6.L)
Cytoskeleton proteins [BR:
xla04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
387282 (tubgcp6.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCP6_N
GCP_C_terminal
GCP_N_terminal
DUF4573
GCP5-Mod21_C
Phage_rep_O
Motif
Other DBs
NCBI-GeneID:
387282
NCBI-ProteinID:
NP_001080919
Xenbase:
XB-GENE-865982
UniProt:
Q9DDA7
Structure
PDB
PDBj
LinkDB
All DBs
Position
3L:78244898..78285795
Genome browser
AA seq
1625 aa
AA seq
DB search
MLSFNLRICGMSSEADRLEELVEYLEQSNGIQISDLHAVLELLVELSGTGPPQLLPPKRD
YFKNNKYVGRNVKYQGYDYYDVQVFEADLGTTVAYQELEISTTIQRTLQIMEAAPGTGLP
ALSFFSQNDLSSDKFEKETRGSLFGALVHSRTNDMDIKLDMPPVPENADLSGLAIKVPQS
IDQSEDEGFQSASNMTPDSQSEPSMTPDIDVWEAVLTYGPSKRRCWERIGCPPGKREEPY
VTEAGREAFDKLYKLHEGGLQILSATTLQPQLVLLEETDLVKAVLNVLIGVVSSTFSYNQ
ALQSFAVKQGVYISGTSPDNVSSLLTQVAEYGTYYTRLSHFSLLTVLDSSHSNGLVFQAF
TSGLRKYLQYYRACVLSTPASLTLLTISFLFRKLGRQLRYLAELCCIGTLVTSATRGIST
AFPTGVKLLSYLYKEALENSSNENYPVLLSLLKTSCEPYTRFIYDWVYSGVFRDVCGEFM
IQVNEDYLGFRDKRYWTHGYVLISKEVEDCVPVFLKHVANEIYICGKTINLLKLCCPKHY
ICWSDIPVPRISVTFSLEELKEMEKDCAVYVARMERIARHSCISKEQKALQTEIARQELI
IQARETTEKVFETFKDRKLAEKLSLDTKKRELFQKLKDQYEKEQERRLTTKQEEADDDFS
YAREIRDREKRLKALEEELELKTRQELIEHYSRLSEEATRKEQRALWKLQRHKLETTRLK
FFLEEQKRMQDLVANFPVDICEENLGVLPDGEISHQTDNTNDAGLGNIENEKSVPEQHAL
HNNNDEVYTAQNCISKSESLCVDVTLPTENVHSQTSNASVLGVPSFDSNLCTPDVDIIDF
LPTLPSENQEVAVVQSLVDDALISIGSDLNTDTKDKESLCALKSDLQESSTGSEYDFKTI
LKPIACTQVSQGHIKIGEYSSNVQPARPRWSTHGHSSDSNIKIGNYVPDINVHQPKHSQH
GHSSDSNINISDHMSDVEPRLPRLNLHGHISTGHIKVGEYASDVEPSTPRHSVHGHASQG
NIKIGENVSDVKLSRPRWNIHGHVSDANIKIGENTTEIAPLRPRWNIHGHASQSHIKIGE
LVSDIEPSQPRRTPFGHPSQSSIPIGDQPVEKYAQKSESEVHSSNSTIQHLLYSNIPDKN
KDTGGTLTDSPVPVPDQGNSNDDTEKRSSTLEQRVQAADSVCDGEASPNTAQSLPCMSDT
LDLGTNGEENVGNDDHTWEKQQEYLKGLAEKYCLEKYQDSYELMSHPPVLHLYSNVMPNR
FSFQTDSDIKSATDETTVQLIELLSLPVLMKYSVTAPMVSHVYLVNKAIVDYYFVELKME
RHFEAMRHFLLMEDGEFAQSLSDMLFEKLGSGQTPSELLNPLVLNSILNKALQYSLHGDS
SLASNLTFALKYLPEVFTPTAPDALSCLELKYKVDWPLNIVITDTCMNKYSRIFSFLLQL
KHMVWTLRDVWFHLKRTALVNQASNSVQYRQLQLYRHEMQHFVKVIQGYIANQILHVTWC
EFRNKLSAVSNLEEIYKTHADYLNKALFRGLLTEKAAPLMNIIHSIFSLILKFRLQLISQ
SWICDTGKQMAVHPNFGLMQQSYNTFKYYSDFLFEVVSKLVNRGYQPHLEDFLLRINFNS
YYKQS
NT seq
4878 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcttttaatttgcgaatatgtggtatgagttctgaggcagaccgtttggaggaa
ctagtagaatatctggaacaatcaaatggtattcaaatctctgatctgcatgctgttctt
gaacttttggtagaactttcaggaacagggcctccccagctccttcctccaaaacgagac
tactttaaaaacaacaaatatgttggcagaaacgtaaaataccagggttatgactattat
gacgttcaggtattcgaagctgaccttgggacaacagttgcatatcaagaattggaaatc
agcaccactattcaaagaacacttcaaataatggaggcagcacctggaacaggtcttcca
gcactaagtttcttctctcaaaacgatctcagcagtgacaagtttgaaaaagagacacgg
gggtcactttttggagctttggtccacagccgaacaaacgacatggacatcaagctcgat
atgccacctgtaccggaaaatgctgacctgtctgggctggcaataaaagttccccagagt
attgaccagtctgaagatgaagggtttcagtcagcctccaatatgacacctgattctcag
tctgagcccagtatgacccctgatattgatgtgtgggaggcagttcttacatatggacca
agcaagaggaggtgctgggaaagaataggctgtccccctggtaaaagagaagaaccatat
gtaacagaagctgggagagaagcatttgacaaactatataagctccatgaagggggactt
cagatcctcagtgctacaactttgcaaccccagcttgtattgcttgaagagactgacttg
gtgaaagctgttcttaatgttcttataggggttgtatcttctacattttcttataatcag
gcccttcagtcttttgcagtcaagcaaggagtttatatatctggaacgtcacctgataac
gtgagcagcctattgacgcaagttgcagaatatggaacatattataccagattgagtcac
ttctctctgcttactgtattggattcatcacatagtaatggtcttgtgtttcaggctttt
accagtggccttaggaaatatctgcagtattatcgggcatgtgttttatcaactcctgca
tcattgactcttctcaccattagcttccttttcagaaaacttggacggcagttgagatat
ttagcggagctttgctgcattggaacacttgttaccagtgccacaaggggcattagtact
gcatttcctacaggggttaagcttctttcatatctatacaaagaagcactggaaaacagc
agcaatgaaaattatcctgtcttgttatcactattaaaaactagctgtgaaccatacaca
aggtttatttatgattgggtgtatagtggtgtcttcagagatgtttgtggagaatttatg
attcaagtaaatgaagattatcttggatttagagataagcgatattggactcatggatac
gttttgatttccaaggaagttgaagactgtgtgcctgtatttctgaagcatgttgctaat
gaaatatatatttgtgggaaaaccattaacttactaaagttatgttgtcctaagcattat
atatgttggtcagatatcccagtacctcgaatatctgtaacattctccctggaagaacta
aaggaaatggaaaaagactgtgctgtctatgttgcacgtatggagagaatagcacgtcat
agttgtattagcaaagaacaaaaggctttacaaacagaaattgcaaggcaagagttaatt
attcaggcacgtgaaacaacagaaaaagtttttgaaacattcaaagatcgcaagctggct
gagaaactgtctttggatacaaaaaaaagagaactttttcaaaagctgaaagaccagtat
gagaaagaacaagagaggcgccttacaaccaagcaagaagaagctgatgatgattttagc
tatgcccgagagatacgtgatcgtgagaagagactaaaggcattagaagaagaactggag
ttgaaaacaagacaagaacttattgagcattacagcagattgtctgaagaggcaactcgc
aaagagcagagggctctttggaaacttcagcgtcataaacttgaaactactcgactgaaa
tttttcttggaggaacaaaaacgcatgcaggacttggttgcaaatttcccagtggatatt
tgcgaagaaaatctgggtgttttaccagatggggaaatatcacatcaaacagacaatact
aatgatgcaggtttgggaaatatagaaaatgagaaatccgttccagaacaacatgcctta
cacaacaacaatgatgaagtgtatactgctcaaaactgtatttcaaagagtgaatctctg
tgtgtggatgttacattacccacagaaaatgtacattcacaaaccagtaatgcttcagtc
ttaggtgtaccatctttcgattccaatctgtgtacacctgatgtggatattattgatttc
ttaccaacattaccctctgagaatcaggaggtagctgtagttcagtctttggtagatgat
gctttaattagcattggttcagatctgaatacagatacaaaggacaaggaaagtctgtgt
gctttaaaaagtgatttacaggaaagtagtactggaagcgaatatgattttaaaaccatt
ctaaagcctatagcatgtacccaagtttcacaaggacacataaaaattggagaatattct
tctaatgtacaacctgcaaggcctcgttggagtactcatggacattcttcagattcaaat
attaaaattggaaattatgtccctgacatcaacgtacaccagccaaagcatagccagcat
ggccattcctcagattctaatataaatattagtgatcatatgtctgatgtggaacctcga
ctgcctcgactgaatttgcatggacacatctccacaggacatataaaagtaggtgaatat
gcttctgatgtagagccttcaacgcccaggcacagtgttcatgggcatgcatcccaggga
aacattaagattggtgagaatgtatcagatgtgaaactatcaaggccacgatggaatatt
catggacatgtgtctgacgcaaatataaaaattggtgagaatactactgagatagcaccc
ctacgacctcgatggaacattcatggacatgcttcacagtctcatattaaaattggagaa
ctagtttctgatatagaaccctcacaacccagaaggaccccttttggccatccatcacaa
tcaagcataccaattggagaccagcctgtggaaaaatatgctcagaagtcagaatcagaa
gtccattcatcaaactctacaattcaacacttactctatagcaacatacctgacaagaac
aaggacacgggaggcacgttaacagattctccagtccctgttcctgatcaaggaaactca
aacgatgacacagagaaaagatcttcaacactagagcagagagtgcaggcagctgattct
gtctgtgatggagaagcatcgccaaatactgcacagagtttgccatgtatgtctgacacc
ctggatcttggaactaacggagaagaaaatgttgggaatgatgatcatacatgggaaaag
caacaggagtatttaaaaggccttgcagagaagtattgccttgaaaaatatcaagacagt
tatgaactaatgtcacatcctccagttcttcacctttatagcaatgtgatgcccaatcgg
ttttctttccaaactgattctgacattaagtcagcaacagatgaaactacagttcaactt
attgaacttctgtctttgccagtactgatgaaatattcagttactgctcctatggtctca
catgtttatcttgtaaacaaagcaatagtggattattactttgtggagctaaagatggag
agacactttgaagctatgagacattttctgctgatggaagatggggagtttgctcagtca
ctgagtgacatgctgtttgaaaagcttggttccggacaaacaccaagtgaactattgaat
ccattggttcttaattctatactgaacaaagctctgcagtacagtttgcatggagactct
tctctggcctccaacctaacctttgcactgaagtatcttccagaagtgttcacacctact
gcccctgatgcattaagctgcttggagttgaaatataaggttgattggcctctcaacata
gttatcactgacacgtgtatgaataagtatagcagaatattttcttttctgctccaactg
aaacacatggtatggacgttaagggatgtttggtttcacctaaaaagaacagcactggtg
aatcaagcttcaaactcagttcagtatagacagctccaactgtatcgacatgaaatgcag
cactttgttaaagtcattcagggctacattgctaaccagattctgcacgtaacatggtgt
gaattcaggaacaaactgtctgccgtgagcaacctggaagagatttacaagacacatgca
gactatttgaacaaagcactctttagggggttattgacagagaaggctgccccactgatg
aacataattcatagtattttcagcctcattctgaagttccgcttgcagttgatctctcaa
tcatggatatgtgacacagggaaacaaatggctgttcatcccaactttggtctaatgcaa
caatcttacaatacattcaagtattattctgactttctttttgaagtggtgtcaaagctt
gtaaacagaggatatcagcctcatctggaggatttcttactgcggattaacttcaacagt
tattataagcagagctag
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integrated database retrieval system
