Xenopus laevis (African clawed frog): 394277
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Entry
394277 CDS
T01010
Symbol
srf.L, srf, srf-A, SRFX, XSRF
Name
(RefSeq) serum response factor
KO
K04378
serum response factor
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
394277 (srf.L)
Transcription factors [BR:
xla03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
394277 (srf.L)
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Gene cluster
GFIT
Motif
Pfam:
SRF-TF
Motif
Other DBs
NCBI-GeneID:
394277
NCBI-ProteinID:
NP_001095218
Xenbase:
XB-GENE-864819
UniProt:
P23790
B7ZPQ5
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All DBs
Position
5L:24674138..24690167
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AA seq
448 aa
AA seq
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MLPSNQAGVAGSGRGLGLARRAGNGAGCPGIRGPGGQYSGSSGSSESGEEEDPPGRGIKR
GLNELELPEQGGAAGVVGYPGASGTVSGAKPGKKTRGRVKIKMEFIDNKLRRYTTFSKRK
TGIMKKAYELSTLTGTQVLLLVASETGHVYTFATRKLQPMITSETGKALIQTCLNSPDSP
PRSDPSTDQRMSATGFEETDLTYQVSESDSSGETKDSLKPAFTVTNLPGTSNIQTVPTTS
TSMQVSSGHSFPITNYLAPVTSANGTVLKTEGGAMSSGGLMQIPAGFTLMSAGGAVAQQV
PVQAIQVHSAAQASPSSDSSSELVQTSSSGTVTLPAAIMTSSVPTTVSGHMMYPSPHAVM
YAPTQGLTDGGLAVLNAFSSAPQMQVSHTQEQGGVQQVFLTAPPGTVQIPVSAVQLHQMT
VIGQQSSGSNLTELQVVNLDTSNSNKND
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgctgcccagtaaccaggccggggtggcggggtcaggccgagggctggggttggcccgc
agggcaggaaatggggctgggtgcccaggtattaggggccctgggggccagtacagcggt
agttcagggagctcagagtcgggggaagaggaggatcctcctgggcgggggataaagagg
gggctcaatgagctggagctgccagaacaagggggggcagcaggagttgttgggtaccca
ggggctagtggaacagtgtcaggggccaaacctgggaagaaaactcggggccgagtgaag
attaagatggaatttattgataacaaattgcggcgctacacgaccttcagcaagcgcaaa
actggcatcatgaagaaggcctatgagctttccaccctgactggcacccaggtgctgctg
ttagttgccagtgagaccggccatgtgtacacatttgccacgcgcaagttgcagcccatg
atcaccagcgagacggggaaagctttgatccaaacctgcctgaattcccctgactctcct
ccccgctcggacccctctactgaccagcgcatgagtgccaccggctttgaggagaccgac
ctcacctaccaggtatctgagtctgacagcagcggggagaccaaggattcgctaaagccg
gcattcaccgtgaccaaccttccaggcacatccaacatccaaacagtgcccaccacctcc
acttccatgcaagtcagcagcgggcactcctttcccatcaccaactacctggcaccagtg
accagcgccaacggcaccgtgctgaaaactgagggtggagctatgagctcagggggatta
atgcaaattcccgcaggcttcactcttatgtcagcagggggagctgtagctcagcaggta
cctgtccaggctattcaggtccattctgcagctcaggcatcgccgtccagtgacagtagt
tcagagttggtgcaaacatcctctagtggaacagtaacactgcctgcagccatcatgacc
tcctccgtgcccacaacagtgagtggtcatatgatgtaccccagtccccatgcagtaatg
tatgcccctacacaaggactaaccgatgggggcctcgctgtgctcaatgccttctcctct
gcgccccaaatgcaagtttctcacacccaggaacaggggggtgtccagcaagttttcctc
actgctccccctggcactgtccagatacctgtgtctgcagtacagctccaccagatgaca
gttattgggcagcagtccagcggcagtaacctgactgagctgcaagtggttaatttggac
acgtcgaacagcaacaagaatgactaa
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