Xenopus laevis (African clawed frog): 394287
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Entry
394287 CDS
T01010
Symbol
vamp2.L, syb2, vamp2, vamp2-a, vamp2-b, vamp2.S, xsybii
Name
(RefSeq) vesicle-associated membrane protein 2
KO
K13504
vesicle-associated membrane protein 2
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04130
SNARE interactions in vesicular transport
xla04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
394287 (vamp2.L)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
394287 (vamp2.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
394287 (vamp2.L)
Membrane trafficking [BR:
xla04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
VAMP
394287 (vamp2.L)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
394287 (vamp2.L)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Synaptobrevin
MCU
Orf78
LMBR1
DUF1676
MgtE
CD34_antigen
Ferlin_C
DUF2970
PRIMA1
Integrase_H2C2
Syndecan
Motif
Other DBs
NCBI-GeneID:
394287
NCBI-ProteinID:
NP_001080944
Xenbase:
XB-GENE-5788238
UniProt:
P47193
LinkDB
All DBs
Position
3L:153260938..153284474
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AA seq
114 aa
AA seq
DB search
MSAPAAGPPAAAPGDGAPQGPPNLTSNRRLQQTQAQVDEVVDIMRVNVDKVLERDTKLSE
LDDRADALQAGASQFETSAAKLKRKYWWKNMKMMIIMGVICAIILIIIIVYFST
NT seq
345 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccccagctgccggcccccctgctgccgccccaggtgatggagctccccaaggc
cccccaaatctcaccagcaacaggaggctccagcagacgcaagcgcaggtggatgaggta
gtggatattatgcgtgtgaatgtagacaaggttctggagagagatacgaagctatccgag
ttggatgaccgtgcagatgccctgcaagctggagcctcgcagtttgagactagtgcggcc
aaacttaaacgcaagtactggtggaagaatatgaagatgatgataattatgggtgtgata
tgtgctatcatcctcatcataataattgtttacttcagcacctaa
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