Xenopus laevis (African clawed frog): 394290
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Entry
394290 CDS
T01010
Symbol
cdh3.S, b-cadherin, cadherin-1, cdh1-a, cdh3, cdh3-a, cdh3-b, cdhc-A, cdhp, E-Cad, E-cadherin, hjmd, l-cam, lcam, P-cadherin, pcad, U-cadherin, uvo, uvomorulin, xb-cad, XB-cadherin, XBcad, xcdh1, XTC~
Name
(RefSeq) EP-cadherin precursor
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04371
Apelin signaling pathway
xla04514
Cell adhesion molecules
xla04520
Adherens junction
xla05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
394290 (cdh3.S)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
394290 (cdh3.S)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
394290 (cdh3.S)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
394290 (cdh3.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xla03036
]
394290 (cdh3.S)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xla04515
]
394290 (cdh3.S)
04090 CD molecules [BR:
xla04090
]
394290 (cdh3.S)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
394290 (cdh3.S)
Cell adhesion molecules [BR:
xla04515
]
Cadherins
Major cadherins
394290 (cdh3.S)
CD molecules [BR:
xla04090
]
Proteins
394290 (cdh3.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
He_PIG
Cadherin_4
BACON_2
Motif
Other DBs
NCBI-GeneID:
394290
NCBI-ProteinID:
NP_001080946
Xenbase:
XB-GENE-6254663
UniProt:
P33148
Structure
PDB
PDBj
LinkDB
All DBs
Position
4S:complement(43337930..43368179)
Genome browser
AA seq
895 aa
AA seq
DB search
MRLLFGTVAVHKRAHMGSTRLRNASVWLCGLLCLLQVVPSINADVSGCKPGFSSAEYIFS
VNRRELERGRKLGKVNFSDCTTRKHGLYDVGDSRFRVLPDGTVLVKRHVKLHKDTKFTIS
TWDARGIKHSTNIAVASKRHRSGEEAHSRSSKLPVLTFPETHTGLKRKKRDWVIPPIKVS
ENERGPFPKRLVQIKSNKDRFNKVYYSITGQGADNPPQGVFRIEWETGWMLVTRPLDREE
YDKYVLSSHAVSENGSPVEEPMEITINVIDQNDNRPKFTQDVFRGSVREGVQPGTQVMAV
SATDEDDNIDSLNGVLSYSILKQDPEEPIPNLFTINRETGVISLIGTGLDREKFPEYTLT
VQATDLEGAGLSVEGKAIIQITDANDNAPIFDPKTYTALVPENEIGFEVQRLSVTDLDMP
GTPAWQAVYKIRVNEGGFFNITTDPESNQGILTTAKGLDFELRKQYVLQITVENAEPFSV
PLPTSTATVTVTVEDVNEAPFFVPAVSRVDVSEDLSRGEKIISLVAQDPDKQQIQKLSYF
IGNDPARWLTVNKDNGIVTGNGNLDRESEYVKNNTYTVIMLVTDDGVSVGTGTGTLILHV
LDVNDNGPVPSPRVFTMCDQNPEPQVLTISDADIPPNTYPYKVSLSHGSDLTWKAELDSK
GTSMLLSPTQQLKKGDYSIYVLLSDAQNNPQLTVVNATVCSCEGKAIKCQEKLVGGFDLP
IILVILGSVLALLILFLLLLLFLKRKKVVKEPLLLPEDDTRDNIFYYGEEGGGEEDQDYD
LSQLHRGLDSRPDIMRNDVVPTLMPAPHYRPRPSNPDEIGNFIDENLDAADNDPTAPPYD
SLLVFDYEGSGSEAASLSSLNSSNSNDEHDYNYLSDWGSRFRKLADMYGGDDDEE
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atgaggcttctgttcgggacggtggctgtgcacaagcgggcgcacatggggagcaccagg
cttagaaacgcgagcgtgtggctttgcggactgctttgcttgttacaggttgtgccttcc
ataaatgcagatgtttctggatgcaagcctggattttcttctgccgaatacattttttct
gtgaaccgtagggagctggagaggggcagaaagctaggcaaagtgaactttagcgactgc
acaacccggaaacatggtttatatgacgtgggagactctcgattcagggtgctgccagat
ggcactgttctagtaaaacgccatgtgaaactgcacaaggacaccaaatttacaatcagt
acgtgggatgcacgtggcattaagcactctactaatattgctgttgcaagcaaacgccat
cgatctggagaggaagctcattcaagatcttcaaagctaccagtgctgacatttccagag
acgcacacaggcctcaaaaggaagaagagagactgggtcatccctcctataaaggtttct
gagaatgaacgtggccctttccccaaacgtctcgtgcagatcaaatccaacaaagaccgg
tttaataaggtttactacagtattactgggcaaggggccgacaaccctcctcaaggagtt
tttcgtatagagtgggagaccggatggatgctagttactcggcctttggatcgtgaagag
tatgataaatatgtgctgtcttctcatgccgtttctgagaatggttctcctgtggaggaa
ccgatggaaataaccatcaatgtgattgatcagaatgataaccgtcccaaattcacacaa
gatgtgttcagaggatctgtcagggagggtgtgcagccaggcacccaggtgatggctgta
tctgcaacagatgaagatgacaatatagacagcctgaacggtgtcctttcctattccatt
ctgaagcaggatcctgaagaaccaattcctaacttgtttaccataaaccgtgaaaccgga
gtgattagcttgattgggacaggtttggacagagagaaatttccagaatatacccttact
gtccaagctacagatctggaaggcgcaggactctccgtagaggggaaagctattattcag
atcactgatgcaaacgacaatgctccaatttttgatccaaaaacttatacagcactggtc
ccagagaatgaaattggttttgaagttcagagactgtctgttacagacttggatatgcct
ggtacncctgcatggcaggcagtctacaagataagggttaacgaaggaggtttttttaat
attacaacagatcccgagtctaatcaaggaatactaacaactgctaagggtctggatttt
gaactgaggaaacagtacgtgcttcaaatcactgtagagaatgctgaacctttctctgtt
ccactaccaacctcgactgctacagttactgtgactgtggaggatgtgaatgaagccccc
ttctttgtaccagctgtcagtagagttgatgtatctgaagacctttcacgtggagagaaa
attatttcacttgtagcgcaggaccctgataagcaacagatacaaaaattaagctacttc
attggcaatgacccagctcgctggcttacagtaaataaggacaatggcattgtcactgga
aatggcaacttggatcgtgagtcagagtatgtcaagaacaatacatatacagtcatcatg
ctggtgacagacgatggtgtttcagttggcactggcaccgggacgctcattctacatgtg
ctggatgtaaatgacaatggtcctgtccccagccctcgagtcttcaccatgtgtgatcaa
aatccagagccccaagtattaacaatcagtgatgctgacatccctccaaacacctaccca
tacaaagtttcactttcacatggctctgatttaacatggaaggctgaacttgacagcaaa
ggaacatcaatgcttctaagtccaacacagcagctgaagaaaggagactacagcatttat
gtgcttctgtctgatgcacaaaataatccgcagctgactgtggtgaatgcaactgtatgc
agctgtgagggaaaagcaataaaatgccaggaaaagcttgtcggtggttttgatctgcca
attatccttgtgatcttgggttcagtcttggctctgttgatactattcttgctgctgctc
ctgtttctgaagagaaagaaggttgtgaaggagcctctacttttgccagaggatgatacc
agggataatatattttattatggagaggaaggtggaggagaggaggatcaggattatgac
ttgagccagctgcacagaggcctagattctcgtccagacataatgagaaacgatgtggtt
cccaccttgatgcctgccccacattacagacctcgtccttcaaacccagatgaaattggt
aacttcattgatgagaacttggatgcagctgacaatgaccccactgctcccccatatgac
tctcttttagtgttcgattatgaaggcagtggctctgaagctgcatcgctcagctccctg
aactcttccaactcgaatgatgaacatgattacaactatttgagtgattggggctcccgc
ttcagaaagttagcagatatgtatggtggagatgatgatgaagagtag
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