Xenopus laevis (African clawed frog): 394326
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Entry
394326 CDS
T01010
Symbol
otx1.L, otx1, otx1-A, xotx1
Name
(RefSeq) orthodenticle homeobox 1 L homeolog
KO
K09326
homeobox protein OTX1
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
394326 (otx1.L)
Transcription factors [BR:
xla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
394326 (otx1.L)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TF_Otx
Homeodomain
Homeobox_KN
SatD
CPSF73-100_C
Motif
Other DBs
NCBI-GeneID:
394326
NCBI-ProteinID:
NP_001081009
Xenbase:
XB-GENE-939807
UniProt:
Q98SI7
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Position
5L:complement(31685746..31693533)
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AA seq
339 aa
AA seq
DB search
MMSYLKQPPYGMNGLGLTGPAMDLLHPSVGYPATPRKQRRERTTFTRSQLDVLESLFAKT
RYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQQQQQQQSSSGAGVKSRPAKKKC
SPARESSGSESSGQFTPPAVSSSGSSSSSSSSSSNSTGNPALTSAPLNGSSSTASSIWSP
ASISPGTAPGSGPDPLGTGSASCMQRSGSSSAASYPMSYSQAAGYTQAYPAPSSSYFSGV
DCSSYLGPMHSHHHPHQLSPMAPSSMSGHHHHHHHLSQTSSHHHHHHHHQGYTSSALPFN
SSDCLDYKEQATASSWKLNFNSTDCLDYKDQASWRFQVL
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcctacctcaaacagcccccctatggcatgaatggcttggggctgacgggacct
gcaatggacttgctgcacccatcagtgggctacccagccactccgcggaagcagcgcaga
gagcgcaccacgttcacccgctcgcagctggatgtgctggagtccctgttcgccaagact
cgttacccggacatcttcatgcgcgaagaagtggccctaaagatcaacctgcccgagtcc
agagtacaggtctggttcaagaacagacgagccaagtgtcggcagcagcagcagcagcaa
caacagcagcagagcagcagcggggccggagtgaagagccgcccggccaagaagaagtgc
agcccggccagagagagttctgggtcggagagcagcggtcagttcactccccccgcggtg
tccagctccggctcttcctcttcgtcctcttcttccagttccaattccaccgggaacccg
gcgttgacttcagccccactgaatggcagcagctccaccgcgtcctccatctggagccca
gcctccatctctcctggcaccgcccctggctctggccccgaccccctgggaacaggcagc
gcctcgtgcatgcagcgctctggctcgtcttctgccgcctcctatcccatgtcctacagt
caggccgccggctacacccaggcctaccccgccccctcctcctcctacttcagcggggtc
gattgcagctcctacctgggccccatgcattcccaccatcaccctcatcagctcagccct
atggccccttcctctatgtctggccaccaccaccatcatcatcacctgagccagacctcc
agccatcaccaccaccatcatcatcaccagggttacaccagctcggccttgccctttaac
tcgtctgactgtctggactataaggagcaagccaccgcctcctcttggaaactcaacttc
aattccaccgactgcctggactacaaagatcaggcctcctggaggttccaggtgttgtga
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