Xenopus laevis (African clawed frog): 394390
Help
Entry
394390 CDS
T01010
Symbol
gtf2b.L, gtf2b, gtf2b-a, gtf2b-b, tf2b, tfiib, XLTFIIB
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
394390 (gtf2b.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xla03021
]
394390 (gtf2b.L)
Transcription machinery [BR:
xla03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
394390 (gtf2b.L)
Prokaryotic type
Archaeal type
TFB
394390 (gtf2b.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Cyclin_C
BRF2-like_C_cyclin_rpt
Sigma70_r4
KIF9
RB_B
Motif
Other DBs
NCBI-GeneID:
394390
NCBI-ProteinID:
NP_001081115
Xenbase:
XB-GENE-6254425
UniProt:
P29054
A0A974D504
LinkDB
All DBs
Position
4L:101753257..101761327
Genome browser
AA seq
316 aa
AA seq
DB search
MASTSRIDALPKVTCPNHPDALLVEDYRAGDMICSECGLVVGDRVIDVGSEWRTFSNDKA
AADPSRVGDAQNPLLSGGDLTTMIGKGTGSASFDEFGNSKYQNRRTMSSSDRAMMNAFKE
ITNMSDRINLPRNIIDRTNNLFKQVYEQKSLKGRSNDAIASACLYIACRQEGVPRTFKEI
CAVSRISKKEIGRCFKLILKALETNVDLITTGDFMSRFCSNLGLTKQVQMAATHIARKAV
ELDLVPGRSPISVAAAAIYMASQASAEKRTQKEIGDIAGVADVTIRQSYRLIYPRAPDLF
PADFKFDTPVDKLPQL
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgacgagtcgcattgatgcacttccgaaggtaacttgcccaaatcatcctgat
gcccttctcgtagaagattatagagctggggatatgatttgttcagagtgcggattggta
gtgggtgatcgtgttattgatgttgggtctgaatggagaacatttagcaatgataaagcc
gctgctgatccttctcgagttggagatgcccaaaatcctctcttgagtgggggagacttg
actacaatgattggcaaggggactggttctgcaagcttcgatgaatttggaaactccaaa
tatcaaaatcgcaggactatgagcagttctgacagggcaatgatgaatgctttcaaagaa
ataacaaacatgtcagacagaatcaaccttcctcgcaatatcattgatcggactaataat
ttatttaagcaggtatatgagcaaaaaagtctaaaagggaggagcaacgatgctatagct
tctgcatgcctctatatcgcctgcagacaggaaggagtccctagaacatttaaagaaatc
tgtgctgtatcaagaatttccaagaaggaaattggcagatgttttaaactcatcctgaaa
gctcttgagacaaatgtggatttgataacgaccggagattttatgtccaggttctgctca
aatctgggccttaccaaacaggtgcaaatggcagctactcacattgcacgcaaagctgtg
gagcttgacttggttccggggagaagtccaatctctgtggcagccgctgccatttacatg
gcatcacaagcatctgcggagaagagaacccaaaaggaaatcggtgacattgcaggagta
gcggatgtgaccatcagacaatcttacagactgatctacccacgggccccagacttgttt
cctgcagacttcaagtttgacacaccagttgacaaattacctcaactataa
DBGET
integrated database retrieval system
