KEGG   Xenopus laevis (African clawed frog): 394429
Entry
394429            CDS       T01010                                 
Symbol
ybx2.S, contrin, csda, csda-A, csda3, dbpc, frgy2, msy2, p54, ybx2, ybx2-a, ybx2-b
Name
(RefSeq) Y-box-binding protein 2-B
  KO
K09276  Y-box-binding protein 1
Organism
xla  Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:xla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:xla03000]
    394429 (ybx2.S)
   03019 Messenger RNA biogenesis [BR:xla03019]
    394429 (ybx2.S)
   03041 Spliceosome [BR:xla03041]
    394429 (ybx2.S)
Transcription factors [BR:xla03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   Cold-shock domain factors, YB-1/DbpB-like
    394429 (ybx2.S)
Messenger RNA biogenesis [BR:xla03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Other mRNA localization factors
     394429 (ybx2.S)
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     394429 (ybx2.S)
Spliceosome [BR:xla03041]
 Common components
  Common spliceosomal components
   General mRNP proteins
    394429 (ybx2.S)
SSDB
Motif
Pfam: CSD OB_RNB Rho_RNA_bind
Other DBs
NCBI-GeneID: 394429
NCBI-ProteinID: NP_001081167
Xenbase: XB-GENE-6254213
UniProt: P45441
LinkDB
Position
3S:complement(131717255..131724049)
AA seq 324 aa
MSEAEPRETEAVTQPEPGPEIHKPDIVPPRNQINKKLLATQVQGTVKWFNVRNGYGFINR
NDSKEDVFVHQTAIKKNNPRKFLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVKGSR
FAPNSTRFRRQFYRPRADTAGESGGEGVSPEQMSEGEKGEETSPQQRPQRRRPPPFFYRR
RFRRGPRPNNQQNQGAEVTDQSENKDPAAPTSEALASGDGQQRPPPRRFQQRFRRPFRPR
PPPPQTPEGGDGEAKAEGEPQRQRNRPYVQRRRAQQPPTVQGESKAEPSEHPASEEGTPS
DAPTDDGAPVETSEAGVEDTTAPE
NT seq 975 nt   +upstreamnt  +downstreamnt
atgagtgaggcggaaccccgagagactgaagcggttacacagccggaacccggacccgag
atccacaagccggacattgtcccgcctcggaaccagatcaacaagaagcttctcgccacc
caagtgcagggaacagtcaagtggtttaacgtccgcaacggttacggatttatcaacaga
aatgacagcaaagaagatgtgtttgtgcatcagactgcaataaaaaagaacaatccacgg
aagtttctgcgcagtgtgggtgatggtgagacggtggagtttgatgtcgtagaaggagag
aagggagcagaggcagccaatgtgacgggcccaggaggggtcccagttaaagggagtcgt
tttgccccaaacagcacgaggtttcgccggcaattctacaggccccgtgcggatactgcg
ggagagtctgggggtgaaggggttagtcctgagcagatgagtgaaggggagaaaggggag
gagacttccccacagcagcgaccccagcgtaggcgaccccctccattcttctacagaagg
cgcttcagaaggggtcccagacccaataaccaacagaaccagggagcagaggttacagac
cagtctgagaataaagaccctgctgcccccacatcagaagccctggctagtggagacggc
cagcagagaccaccccctcgcaggttccagcaaagattccgcaggcctttccgtcctcgc
cccccacctccacagaccccagaagggggagatggagaagccaaagctgaaggtgaacca
cagaggcaacgtaaccgaccgtatgtccaacggcgcagggcccaacaaccacccacagtc
cagggtgagagcaaagcagaaccaagtgagcaccctgcttctgaagaaggaacccctagt
gatgcacccacagatgatggagcacccgttgagacatcagaagcaggagtggaggataca
actgccccagaatga

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