Xenopus laevis (African clawed frog): 397772
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Entry
397772 CDS
T01010
Symbol
hnrnpa3.L
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A3 homolog 1
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
397772 (hnrnpa3.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xla03019
]
397772 (hnrnpa3.L)
03041 Spliceosome [BR:
xla03041
]
397772 (hnrnpa3.L)
Messenger RNA biogenesis [BR:
xla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
397772 (hnrnpa3.L)
mRNA cycle factors
Common to processing body (P body) and stress granule
397772 (hnrnpa3.L)
Spliceosome [BR:
xla03041
]
Common components
Common spliceosomal components
hnRNP proteins
397772 (hnrnpa3.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
397772
NCBI-ProteinID:
NP_001081318
Xenbase:
XB-GENE-17331347
UniProt:
P51968
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All DBs
Position
9_10L:complement(77954010..77968824)
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AA seq
373 aa
AA seq
DB search
MPRGGMDDHWPSSDDQGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEQWGKLTDCVVMR
DPQTKRSRGFGFVTYSCVEEVDASMSARPHKVDGRVVEPKRAVSREDSARPGAHLTVKKI
FVGGIKEDTEEYHLRDYSESYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKY
HTINGHNCEVKKALSKQEMQTASAQRGRGGGGSNFMGRGGNYGGGDGGNFGRGGGGGFGN
RGGYGGGGGRGGGGYGGGGDGYNGFGGDGGNYGGGPGYGGRGYGGSPGYGNQGGGYGGGG
GGYDGYNESGNFGGGNYNDFGNYGGQQQSNYGPMKGGSFSGRSSGGSGSGPYGGGYGSGG
GGGGGGSYGGRRF
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgtggcggaatggatgaccattggccttcttctgatgaccagggacatgaccca
aaggaacctgaacagctaagaaagctgtttattggtggcctgagctttgagacaacagat
gacagcttgagggagcattttgaacaatggggaaagctcacagactgtgttgttatgaga
gatccacagacaaagcgttccaggggctttgggtttgttacttactcatgtgtagaggaa
gtagatgcttctatgtctgctagaccgcacaaagttgatggccgtgttgttgaacctaaa
agggcagtttccagagaagattctgcaagaccgggtgcacatctaacagtaaagaagata
tttgtgggtggaattaaagaagatacagaagaataccacttgcgtgactactctgaaagt
tatggcaagattgaaactattgaagttatggaagaccgtcaaagtgggaagaaaagaggc
tttgcatttgttactttcgatgatcatgatacagttgacaaaatcgttgttcagaaatat
cacacaatcaatgggcataactgtgaagtaaagaaagctctttccaaacaagagatgcaa
acagccagtgcacaaagaggtcgaggaggaggaggaagtaatttcatgggccgcggcgga
aactatggtggaggtgatggtggaaactttggccgaggaggtggcggtggatttggtaac
agaggtggctatggaggaggtggaggccgagggggaggaggctatggaggtggtggtgat
ggctacaatggatttggtggagatgggggtaattatggaggtggacctggctatggcggc
agaggttatggaggtagtccaggctatggaaaccaaggtggtggatatggtggcggcgga
ggaggatatgatggctacaacgaaagcggaaactttggcggtggaaattataatgacttt
ggaaactatggaggacagcaacaatcaaattatggccctatgaaaggtggcagcttcagt
ggaaggagctctggtggaagtggcagtggtccctatggtggcggatatggatccggtgga
ggaggtggtggtggtggaagttatgggggcagaagattttaa
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