Xenopus laevis (African clawed frog): 397799
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Entry
397799 CDS
T01010
Symbol
smc4.L, hCAP-C, SMC-4, smc4, xcap-c, xsmc4
Name
(RefSeq) structural maintenance of chromosomes protein 4
KO
K06675
structural maintenance of chromosome 4
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xla03036
]
397799 (smc4.L)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
397799 (smc4.L)
Condensin II
397799 (smc4.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
TPR_MLP1_2
AAA_15
AAA_29
THOC7
Crescentin
Motif
Other DBs
NCBI-GeneID:
397799
NCBI-ProteinID:
NP_001081371
Xenbase:
XB-GENE-5865892
UniProt:
P50532
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All DBs
Position
5L:complement(122436917..122469120)
Genome browser
AA seq
1290 aa
AA seq
DB search
MPPKKTKTSTAVAREATESPMAERSRAPDALQADPPAPTQESNNELVDSRSLEEILSGIP
PPPPPAMTNEAGAPRLMITHIVNQNFKSYAGERILGPFHKRFSCIIGPNGSGKSNVIDSM
LFVFGYRAQKIRSKKLSVLIHNSDEHKDVQSCTVEVHFQKIIDKEGDDFEVIPNSNFYVS
RTAYKDNSSVYHISGKKATFKDVGLLLRSHGIDLDHNRFLILQGEVEQIAMMKPKGQTEH
DEGMLEYLEDIIGSERLKEPIQILCRRVELLNEQRGEKLNRVKMVEKEKDALEGEKNKAI
EFLTVENETFKKKNQLCQYYIHDLQKRSRDKEAQKEKIQEDTKDISEKSNTLLETMKEKN
KALKDVEKQLNKITKFIEENREKFTQLDLQDVDTREKLKHSKSKVKKLQKQLQKDKEKVD
ELKNVPANSQKIIAEETNKKDLLEKQKEKEEEKLKNVMDSLKKETQGLQEEKEVKEKELM
EISKTVNEARSKMDVAQSELDIYLSRHNSALSQLNKAKEALNTASATLKERRAAIKELET
KLPKDEGDLKKREKELESLVSEEGNIKNQVRELRQKVEEARSSLSANRSRGKVLDALIQQ
KKSGKIPGIFGRLGDLGAIDEKYDVAISSSCGALDHIVVDTIDTAQECVNFLKKQNVGVA
TFIGLDKMKVWEKGLNKIQTPENIPRLFDMVKVKDEQIKPAFYFALRDTIVANNLDQATR
VAFQKDKRWRVVTLQGQIIEQSGTMTGGGGKVMKGRMGSSVMVEISDDQLQKMENKLKTD
TTRATEIQDRKAHLEEEVAKLRQATREMKNTFEKYTASLQSLSEQEVHLKAQVKELEVNV
AAAAPDKNQQKQMEKNLETLKKEYEKVAEKAGKVEAEVKRLHKLIVDINNHKLKAQQDKL
DKVTKEIDECASAITKAQVSIKTADRNLKKSEEAVARTEKEIVANDKSIEELTEDLKKLE
EKATTVMNECKEAECSLPEVQEQHRSLLQEIKAIQEKEHALQKEALNIRLNIEQIDSHIA
EHQSKIKYWQKEITKISLHKIEDIPEEVLPGLAQEELEAIKDPDQIINQIALLEAKSHEM
KPNLGAIAEYKKKEELYLQRVAELDEITNERDSFRRAYEDLRKQRLNEFMAGFNIITNKL
KENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNLSGGEKTLSSLALVFA
LHHYKPTPLYFMDEIDAALDFKNVSIVAFYIYEQTKNAQFIIISLRNNMFEIADRLIGIY
KTHNTTKSVATNPKIIAAKGLAEMQSVGCA
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
atgccacccaaaaaaaccaagacgtccacagcggtggctagagaggccacagaaagcccc
atggctgagaggagccgggctcccgacgcgttgcaagccgaccctccggcacctacacaa
gaatctaataatgagctggttgatagtcgaagtttagaagagattttgagtggcatccct
cctcccccacctcctgcaatgacaaatgaagctggagctcctcgtctcatgataacccat
attgtaaaccaaaacttcaaatcttatgcaggagaacgcattttggggccttttcataag
cgtttttcgtgcataattgggcccaatggcagtggaaaatctaatgtgattgattcaatg
ctctttgtttttggatatcgagcccagaagataagatccaaaaagctctctgtgctgatc
cacaattcagatgagcacaaagacgttcaaagttgtacagtagaagttcattttcaaaag
atcatagacaaggaaggggatgattttgaagtaattccaaatagcaatttctatgtatcc
agaactgcttataaagataattcttctgtctaccacataagtggcaaaaaggcaaccttt
aaggatgttggccttctactccgaagtcatggaattgacttggatcacaatcggttctta
atcttgcagggtgaagttgaacagattgcaatgatgaaaccgaaaggtcaaactgaacat
gatgaaggcatgctggaatatttagaggatatcattggttcagagagattaaaggagccc
attcaaatactatgccgcagagtagagctactaaatgagcaaagaggagaaaagctaaat
agagttaagatggtagaaaaagaaaaggatgcattagaaggagagaaaaataaagcaata
gaattccttactgtagagaatgaaacgttcaagaagaaaaatcagctgtgtcagtactac
atacatgacctgcaaaaacgatcacgtgataaagaagcccaaaaagagaagatacaagaa
gatacaaaggatattagtgaaaaaagcaatacgcttttggaaaccatgaaagaaaagaac
aaagcacttaaagatgtggagaagcagcttaataaaataacaaagttcatcgaagaaaac
agagagaaatttactcagttggatttacaagatgtcgatacccgtgagaaactgaaacac
tcaaaaagcaaagttaaaaaactacaaaaacagcttcaaaaagacaaagaaaaggttgat
gaattaaagaatgtgcctgctaacagccagaaaattattgctgaagagacaaataagaaa
gatctgctggaaaagcagaaggagaaagaggaagagaagcttaaaaatgttatggatagt
ctgaagaaggaaacccaaggtttacaagaggaaaaggaggtaaaagaaaaagaactgatg
gagattagcaaaactgtgaatgaggcgcgttcaaaaatggatgtagctcagtcagagctg
gatatatatttgagccgccataatagtgcattgtctcaacttaataaagcaaaagaggct
ttaaacacagcttcagcaactctaaaggaaagaagagctgccataaaggagctagagacc
aagttacccaaggatgaaggtgaccttaagaaacgagaaaaagagcttgaaagcctagtt
tctgaagaaggaaatatcaagaatcaagttcgggagttaaggcagaaagtagaagaagca
aggagttcattgtctgcaaaccgtagcagaggaaaagttcttgatgccttgattcagcag
aagaaatctggcaaaatacctggaatctttgggagactgggtgatcttggtgctattgat
gagaagtacgacgttgccatttcatcatcatgtggtgcgctggatcatattgttgttgac
accattgatacagcccaagaatgtgtaaatttcctgaagaaacaaaatgttggagtggct
actttcattggcttagacaagatgaaagtgtgggaaaaaggcctcaataaaattcagaca
cctgagaatattccccgtttattcgatatggtgaaagtgaaagatgaacagataaagcca
gcattttattttgccttgcgcgataccatagttgcaaataatttggatcaagcaaccaga
gtggcttttcagaaggataaacgctggagagttgtgaccctgcaaggacagattatagag
caatcaggtactatgactggtggtggtggaaaagtgatgaaaggtagaatggggtcgtct
gttatggttgaaatttcagatgatcagttacaaaaaatggaaaacaaactgaagactgac
actaccagagctacagaaattcaggatcgcaaagctcacctggaagaggaagtagccaaa
ctccgtcaggccacgagggagatgaaaaatacttttgagaagtacacagccagcctccag
agcctttctgaacaagaggtacatctgaaagctcaggtaaaggagctggaagttaatgtt
gctgcagcagcaccagataagaaccaacaaaaacagatggagaaaaaccttgaaactttg
aaaaaagaatatgaaaaagttgcagagaaagctgggaaagtggaagctgaagtgaaaagg
ctgcacaagctgatagtcgatattaataatcacaagctgaaagctcagcaagacaaatta
gataaagtcactaaagagattgatgaatgtgcctctgctattactaaagctcaagtttca
atcaaaacagcagacagaaacctgaaaaagtcagaggaggctgttgcacgcactgagaag
gaaattgtagcgaatgataaatctatagaagaactcactgaagacttgaaaaaattggag
gagaaagcgacgacagtaatgaatgagtgcaaagaagctgagtgctcccttccagaggtt
caggagcaacatcgcagcttgcttcaggaaatcaaagccattcaggagaaggagcatgct
cttcagaaggaagcactgaacatcagacttaacattgagcagatagacagtcacatagca
gagcatcagtcaaaaatcaaatactggcaaaaagagataacgaaaataagtctccacaag
attgaagacatcccagaggaagttcttcctggtttagcacaagaggaattggaagcaatc
aaagatcctgatcaaataataaatcagattgcacttttggaagcaaaaagtcatgagatg
aagccaaaccttggagctatagcagagtataagaagaaggaggaactttatctccagcga
gtggctgaacttgatgaaatcaccaatgaaagggacagttttagacgtgcgtatgaagat
cttcgcaaacaaaggctgaatgaattcatggcaggctttaatatcatcacaaataagttg
aaagaaaactaccagatgctgacactggggggagacgctgagctggaattagtagacagt
ctggacccattttcagaaggcataatgtttagtgtgaggcccccaaagaagagctggaag
aaaatattcaacctgtcaggtggtgagaaaacactgagttctttggcgctggtatttgct
cttcaccattacaaaccaacaccactttacttcatggatgaaatcgacgcagctttggac
ttcaaaaatgtatccattgtcgcattctatatatatgaacaaaccaaaaatgcccagttc
ataattatatctctaagaaacaacatgtttgagattgcagacagactcattggaatttat
aagacgcacaatactacaaagagtgttgccacaaatccaaagataattgcggcaaaggga
ctcgctgagatgcagtcggtgggatgtgcgtga
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