Xenopus laevis (African clawed frog): 397812
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Entry
397812 CDS
T01010
Symbol
abcb1.L, abcb1, MDR, xemdr
Name
(RefSeq) ATP binding cassette subfamily B member 1 L homeolog
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
397812 (abcb1.L)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xla02000
]
397812 (abcb1.L)
04147 Exosome [BR:
xla04147
]
397812 (abcb1.L)
04090 CD molecules [BR:
xla04090
]
397812 (abcb1.L)
Enzymes [BR:
xla01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
397812 (abcb1.L)
Transporters [BR:
xla02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
397812 (abcb1.L)
Exosome [BR:
xla04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
397812 (abcb1.L)
CD molecules [BR:
xla04090
]
Proteins
397812 (abcb1.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_16
RsgA_GTPase
Zeta_toxin
AAA
AAA_5
Rad17
AAA_7
G-alpha
AAA_14
DUF87
AAA_15
AAA_24
APS_kinase
DUF815
YebG
Motif
Other DBs
NCBI-GeneID:
397812
NCBI-ProteinID:
NP_001081394
Xenbase:
XB-GENE-953838
UniProt:
Q91586
LinkDB
All DBs
Position
6L:29130741..29174705
Genome browser
AA seq
1287 aa
AA seq
DB search
MEPEQKTAQNGSADIAVAISDPNSNSKEKKGFFSKFKKKKEKTEKPPKVGVFTMFRYSST
SDKMLMLFGTIASLAHGAALPLMMLVFGEMTDSFVNVGQVDTGNFTWESMINASRELQGQ
MTTYAYYYSGLGFGVMLCAYIQISFWTLSAGRQIKKIRSNFFHAVLRQEIGWFDINDAGE
LNTRLTDDVSKINEGIGDKIAMLLQSLTTLVTGFIIGFIKGWKLTWVMGAISPIMGLSAA
IWAKVLSAFTNKELKAYAKAGAVAEEVLSSIRTVFAFGGQNKEIHRYEKNLEDAKKIGIK
KAITANVSIGFAFLMIYAAYSLAFWYGTTLIIDGGYTIGSVLTVFFAVIIGAFAVGQTSP
NIEAFANARGAAYTIFNIIDNQPKIDSFSKEGLKPDKIKGDIEFKNVIFTYPSRKDIQVL
KGLNLNIPSGKTVALVGSSGCGKSTTVQLIQRFYDPEDGVITLDGQDIRSLNIRYLREII
GVVSQEPILFDTTIADNIRYGREDVTKEEIERATKEANAYDFIMKLPDKLETLVGERGTQ
LSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQSALDKAREGRTTIVVAHRLS
TIRNANAIAGFDNGVIVEQGSHKELMERGGVYFNLVTLQTVETSKDTEEDLETHIYEKKI
PVTHTHSNLVRRKSSRNTIKSKVPETEDKEVDEEEKKKEEGPPPVSFFKVMKLNKPEWPY
FVVGVICAMINGATQPAFAIIFSRIIGVFAGPVSQMRSESSMYSLLFLALGGVSFITFFL
QGFTFGKAGEILTMRLRLGSFKSMLRQEIGWFDDSKNSTGALTTRLATDASQVQGATGTR
LALLAQNVANLGTAIIISFIYGWQLTLLILAIVPVIAAAGLVEMKMFAGHAKKDKKELEK
AGKISTDAVLNIRTVVSLTRERKFEAMYEKSLEGPYRNSIKKAHLHGLTYGLSQAHHVLC
LCWVFSVLGAYLVVEGLMKLDEVFLVSSAIVLGAMALGQTSSFAPDYTKAMISAAHIFSL
LERVPQIDSYSDQGEKPKNCSGNVVFKGVNFNYPTRPDITVLQGLDISVKQGETLALVGS
SGCGKSTTVSLLERFYDPFEGEVLVDGLSVRNLNIQWVRAQMGIVSQEPILFDCSIGDNI
AYGDNNRKVTQEEIETAAKEANIHSFIESLTDKYNTRVGDKGTQLSGGQKQRIAIARALI
RKPKILLLDEATSALDTESEKVVQEALDKARMGRTCIVIAHRLSTIQNADKIAVIQNGKV
VEQGTHQQLLQLKGVYFSLVTIQLGHS
NT seq
3864 nt
NT seq
+upstream
nt +downstream
nt
atggagccagagcagaagactgcgcagaacggttcagccgacatcgctgtcgccatttca
gaccccaattcaaacagtaaagaaaagaaaggctttttctccaaattcaaaaagaaaaaa
gaaaaaacggagaaacccccaaaggttggagtgtttactatgtttcgctattctagtaca
tcggacaagatgctaatgctgtttggtaccatagcatcgcttgcccacggagctgccctg
ccgctaatgatgcttgtgtttggggagatgactgacagctttgttaatgttggacaggtt
gatacagggaactttacatgggaatctatgataaatgcctcaagagaactgcagggccaa
atgaccacatatgcctattattactcaggcttgggatttggagtgatgctttgtgcctac
attcagatttccttctggacactctcagcaggtagacagattaaaaaaatcaggagcaac
ttttttcacgctgtgctgcggcaggagattggatggtttgatataaatgatgcaggagaa
ctgaacacacgactcacagatgatgtttccaaaattaatgaaggaatcggtgataaaatt
gcaatgctgcttcagtcattaacgacattggtgactggcttcattattggctttattaaa
ggatggaagctgacttgggttatgggggctattagtccaattatgggactctctgctgct
atctgggcaaaggtattgtctgcattcactaacaaagagctcaaagcctacgccaaagct
ggggctgttgctgaagaggttctttcgtctattaggactgtgtttgcctttggtggtcaa
aataaagaaatacataggtatgaaaaaaatctagaggacgcaaaaaaaataggaataaaa
aaagctataactgccaatgtgtccattggatttgctttcctaatgatatatgcagcctat
tcactcgccttttggtatggtaccaccctgattattgatggaggttataccattggctct
gttctcacagtattctttgcagtcatcattggtgcttttgctgttggacaaacctctcca
aatattgaagcttttgccaatgccaggggggcagcatacacaatattcaacatcattgat
aatcaacccaaaatagacagcttttctaaagaaggcttgaaaccggacaagattaaagga
gacattgaatttaaaaatgttatattcacttatccatctagaaaggatattcaggttctg
aagggcttgaacctgaatataccaagcggtaaaaccgttgctttagttggaagcagtggt
tgtggaaaaagtacaacagttcagctcatccagaggttctatgaccctgaagacggcgtt
atcacacttgatggacaagacattcgttctttaaatatcaggtacttaagggagatcata
ggagtggtaagccaggaaccaatcttatttgacaccacaattgctgataatattcgttat
ggtcgggaagatgtgacaaaggaggaaattgaaagagcaactaaagaagcaaatgcatac
gactttatcatgaaactgccagataaattggaaactcttgttggagagcgtggcacgcag
ctcagtgggggacaaaagcaaaggattgccattgccagggcattggttcgcaatcccaaa
atcctccttctagatgaggcgacatctgctctggatacagagagtgaagctgtggttcag
tctgctctggataaggcaagagagggccgtaccacaattgtagttgcccatcgtttgtcc
actatacgaaatgcaaatgcaatcgctggctttgataatggtgtcatcgttgaacaagga
agccataaggaactaatggaaagaggaggagtttacttcaacctggtcactctgcagacc
gtggaaacaagtaaagacactgaagaagatttagaaacccacatatatgaaaagaaaata
cctgttactcatacccattccaacctggtcaggaggaaatccagccgaaacacaataaag
agcaaagtcccagaaacagaagataaagaagtggatgaagaggagaagaaaaaggaggag
ggtcccccacctgtctcattcttcaaagttatgaagttgaacaagccagagtggccttat
tttgtggttggagtgatctgtgcaatgataaatggtgccactcagcctgcatttgccatt
atcttctccaggattattggggtgtttgctggtccagtttcacaaatgagatctgaaagc
tccatgtactctttgctgtttttggcacttggtggggtatccttcattacattcttcctg
cagggattcacctttgggaaagctggagaaattcttactatgagactgcgacttgggagt
ttcaaatccatgttaagacaggaaatcggctggtttgatgactccaagaacagtacgggg
gcactgacgacaaggcttgccactgatgcttcacaagttcaaggggcaaccggaaccaga
ctggctttgcttgctcagaatgtagcaaatctgggcacagccatcatcatatcatttatt
tacggatggcaattgacccttctcattttggcgattgttccagtcatcgctgctgcaggc
ctggtggaaatgaaaatgttcgctggacatgcaaaaaaggacaaaaaggaacttgaaaaa
gcaggaaagatttcaaccgatgctgttttgaatatcagaactgttgtgtccctgacccga
gagaggaaatttgaagcgatgtatgagaaaagtctggaagggccttacaggaattctatt
aagaaagcccatctccatggattgacctacggtctgtctcaagcccatcatgtactctgc
ctatgctgggtgttttccgttttgggagcctatttagtggttgaaggtttaatgaagttg
gatgaggtttttctggtctcctcagccattgtgttgggtgccatggccttaggccagacc
agctcctttgcccctgactatactaaagccatgatttcagcggctcatatattcagcttg
ttggagagagtcccacagattgacagctacagcgaccagggcgagaaaccaaaaaactgc
agtgggaacgtggtattcaaaggggttaattttaactaccctacacggccagacataaca
gtgctgcagggactggatatctccgtaaagcaaggggagacgctggccctggttggaagc
agcggctgtggaaagagtacgaccgtgtcactactggagagattctatgacccgtttgaa
ggagaagtgttggtagacggcctttctgtgaggaatctgaacatccagtgggtgagggcg
cagatgggaatcgtctcccaggagcccattttgtttgactgcagcattggtgacaatatc
gcttacggggataacaacagaaaagtgacgcaagaagaaatagaaacagcagctaaggaa
gccaacatccacagcttcatcgaatctcttactgataaatacaacacccgcgtgggagat
aaaggcacccagctctcagggggacagaagcagcgtatagccatagcaagggctctgatt
cggaaacccaaaatccttctgctggacgaggccacctctgcgctcgacacagaaagtgaa
aaggttgtgcaagaagcactggacaaagccagaatgggccgcacgtgtattgtcatcgct
catcgactatcgaccatacagaatgcagataaaatagccgtcatacagaatggaaaggtg
gtagagcaagggacacatcagcagctccttcagctcaagggcgtttacttttctttagtg
actatacagcttggccactcctga
DBGET
integrated database retrieval system
