Xenopus laevis (African clawed frog): 397813
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Entry
397813 CDS
T01010
Symbol
hes1.L, hes-1, hes1, hes1-a, hes1-b, Xhairy-1, Xhairy1, Xlh1
Name
(RefSeq) transcription factor HES-1-A
KO
K06054
hairy and enhancer of split 1
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03460
Fanconi anemia pathway
xla04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
397813 (hes1.L)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
397813 (hes1.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
397813 (hes1.L)
03400 DNA repair and recombination proteins [BR:
xla03400
]
397813 (hes1.L)
Transcription factors [BR:
xla03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
397813 (hes1.L)
DNA repair and recombination proteins [BR:
xla03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex binding factors
397813 (hes1.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hairy_orange
HLH
Spectrin_1st_PEPL
bHLH_NCOA
Motif
Other DBs
NCBI-GeneID:
397813
NCBI-ProteinID:
NP_001081396
Xenbase:
XB-GENE-865756
UniProt:
Q6IRB2
A0A974HJQ8
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All DBs
Position
5L:complement(113862496..113864728)
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AA seq
267 aa
AA seq
DB search
MPADVMEKNSSSPVAATPASVSNTPDKPKTASEHRKSSKPIMEKRRRARINESLGQLKTL
ILDALKKDSSRHSKLEKADILEMTVKHLRNLQRVQMSAALSTDPSVLGKYRAGFSECMNE
VTRFLSTCEGVNTDVRTRLLGHLANCMNQINGMNYPTQPQMPSAAAPHPAYGQPMVQLPG
AAPQSSPAPIACKMGGPPVEAAKVYGGFQLVPAPDGQFAFLITNPAFPHNGSVIPVYTNS
NVGTALPPSVSPSVMPSVTIDSVWRPW
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgccggctgatgtgatggagaagaactcttcatccccagtggctgccaccccggccagt
gtgagcaataccccggataaacccaaaactgcctccgagcacagaaagtcctccaagccc
atcatggagaagagaaggagagccaggatcaacgagagcctcgggcagctcaaaaccctc
atcctggatgcgctcaagaaagatagctcccggcactccaagctggagaaggcagatata
ttggagatgacagtgaaacacctgaggaacctgcagcgggtgcagatgagcgctgcactg
agtacagacccttcagtactgggcaagtacagagctggattcagcgagtgcatgaatgaa
gtaacccgattcctgtctacctgtgaaggggtcaacacagatgtccggacccgactcctg
gggcatcttgccaactgcatgaaccagatcaatggcatgaactaccctacccagccccag
atgccttctgcagccgcaccccaccctgcctacggacagcccatggtccagctcccagga
gcagctccacagagcagcccagctcccattgcgtgcaagatgggtggtccaccagtcgaa
gctgccaaagtgtatggaggcttccagcttgtgccagccccagatggacagtttgccttc
ctgatcacaaacccagctttccctcacaacggatctgtcattcctgtctacaccaactcc
aatgtgggcaccgcattgccaccttcagtgtctccttcagtaatgccatcagtcacaatt
gattctgtttggaggccctggtaa
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