Xenopus laevis (African clawed frog): 397842 Help Entry 397842            CDS       T01010                                  Symbol itga5.S Name (RefSeq) integrin alpha-5-like isoform X1   KO K06484   integrin alpha 5 Organism xla  Xenopus laevis (African clawed frog) Pathway xla03266   Virion - Herpesvirus xla04145   Phagocytosis xla04510   Focal adhesion xla04512   ECM-receptor interaction xla04517   IgSF CAM signaling xla04518   Integrin signaling xla04810   Regulation of actin cytoskeleton xla04820   Cytoskeleton in muscle cells xla05100   Bacterial invasion of epithelial cells xla05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:xla00001]  09120 Genetic Information Processing   09125 Information processing in viruses    03266 Virion - Herpesvirus     397842 (itga5.S)  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     397842 (itga5.S)    04517 IgSF CAM signaling     397842 (itga5.S)    04518 Integrin signaling     397842 (itga5.S)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagocytosis     397842 (itga5.S)   09144 Cellular community - eukaryotes    04510 Focal adhesion     397842 (itga5.S)   09142 Cell motility    04820 Cytoskeleton in muscle cells     397842 (itga5.S)    04810 Regulation of actin cytoskeleton     397842 (itga5.S)  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     397842 (itga5.S)   09171 Infectious disease: bacterial    05100 Bacterial invasion of epithelial cells     397842 (itga5.S)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:xla04147]     397842 (itga5.S)    04515 Cell adhesion molecules [BR:xla04515]     397842 (itga5.S)    04090 CD molecules [BR:xla04090]     397842 (itga5.S) Exosome [BR:xla04147]  Exosomal proteins   Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)    397842 (itga5.S) Cell adhesion molecules [BR:xla04515]  Integrins   Integrin alpha subunits    397842 (itga5.S) CD molecules [BR:xla04090]  Proteins   397842 (itga5.S) SSDB OrthologParalogGFIT Motif Pfam:  Integrin_A_Ig_3 Integrin_A_Ig_1 Integrin_A_Ig_2 FG-GAP FG-GAP_3 Integrin_alpha Membra_charge Motif Other DBs NCBI-GeneID:  397842 NCBI-ProteinID:  XP_018105612 Xenbase:  XB-GENE-17340799 UniProt:  A0A1L8HAA6 LinkDB All DBs Position 2S:136689443..136821633 Genome browser AA seq 1049 aa AA seqDB search MQQPQGSRVRRLVAFFFPVLCALLTFSSVRGFNLAVEQPAVYTGAGGSFFGFSVDFYLPD AQSISILVGAPKANTSQPGVSEGGAAFYCPWQRNGTNCTEINFDSEGDRKRVLGNSTQPE HMESKSGQWFGATVRAHGKTILACAPQYSWRTKKEEKHSDAVGTCYLSVNNFTTFIEYSP CRTDFSDTAGQGYCQGGFSAEFTKSGRVLLGGPGSYFWQGQVITATQDEIQEAYYPEYFV LEYKKQMKTRQAASSYDDSYFGYSVAVGEFSGDDTEDFIAGVPKGNLTYGYVTILNGTDL RSLYNFSGEQMASYFGYSVSATDLNSDGLDDLLIGAPLFMDRTHDGRVQEVGRVYIYLQG DLMKGTPQVILTGMEEYGRFGSSIASLGDLDQDGFNDIAIGAPFGGEAQRGEVFIFNGQP GGVDSKPSQVLQGQWGSSQQPSFFGLSTRGGQDLDGNGYPDLIVGAFGVDKTLVYRGRPI IHASASLSISPNMFNPEEKTCTIEGNASAVSCINLSFCLNASGKHVPNSIGIKVELQLDQ MKQKGAVKRALFLKSRQPQLTQTIHLLNGSKEECRAMKIYLREESEFRDKLSPIYIGLNF SLDPLAPADAHGLMPIFNYKTKNYIEQKAQIQLDCGEDNICVPDLKLNVSGDRKSVYLGD ENFLTLFFSAQNLGGGAYEAELYVTLPPEAEYSGIVRNNENLLILPCAYEMENQTRLVIC DLGNPMKTGASLAGGLRFTVPHLRDSSHKVQFDFQIRSKNQNNSQSETVHLALNVEAQST VSFFGASKPDSVIFPVANWKPGRNPMTGQEAGPEVKHVYELVNFGPSSISQGILELRCPM RVNKEYAMYMMSYSVQGLTNCTSNHPANALHLQHSPTDQPPTLNPKTVHHVERRDTARLI SGASNVLKCNEPHVDCFHLHCNVGSLEKQQRAILRVNFLIWANTFMQKENQGFTLQCEAL YHIQKLPYKILPHVYPKGTHQVDTAVHWAKPESSYGVPLWIIILAILIGLLLLALLIYVL YKLGFFKRSLPYGTAMEKAELKPQAASEA NT seq 3150 nt NT seq  +upstreamnt  +downstreamnt atgcagcagccacaaggctcccgtgtccgtagactagtggccttcttcttccctgtgctg tgcgccctgctcaccttcagctcagtccgtggatttaacttggcagtggagcagccggca gtttacactggggcaggaggcagtttctttggtttctctgtggacttctacctcccagat gcgcagagcatcagtatcctggtgggggcccccaaggcaaataccagccagccaggagtg tctgaagggggagctgccttttattgcccgtggcaaagaaatggcaccaactgcacagaa atcaactttgactcagaaggtgaccggaagagagtactgggcaattctacccaacccgaa cacatggaatccaagtctgggcaatggtttggcgccactgtccgggcacatgggaaaaca atactggcttgtgctccacaatacagctggagaaccaaaaaagaagaaaagcacagtgac gctgtgggcacctgttatttatctgtcaataacttcaccacatttatagagtattctccc tgccgcacagatttcagtgatactgccggacaagggtactgccaaggaggtttcagtgct gagtttacaaagagtggaagagttttactgggaggaccaggcagctacttctggcaaggt caggtgatcactgcaacacaggatgagatccaggaggcttattatccagaatattttgtg ctggagtacaagaaacaaatgaagacacggcaggctgcttcatcatatgatgacagttac tttggttattcggtagcagttggtgaattcagtggagatgacactgaagatttcattgcg ggtgttcccaagggaaacctaacttatggctatgtgactatactgaatggaacagacttg agatctttgtataacttttcaggtgaacagatggcctcctattttggatattctgtgtcg gctactgacctcaatagtgatggactagatgacctgttaatcggagcaccactctttatg gataggacccatgatggcagggtgcaggaagttggacgtgtttatatttacctgcagggg gaccttatgaaaggcacaccccaagtaatccttactggaatggaagaatatggccgcttt ggtagttccattgcatccctaggagatttggatcaggatgggtttaatgatattgccatt ggtgctccttttggaggagaagcccaaaggggagaagttttcatttttaatggccagcca ggtggtgttgattccaagccatcacaggtgctgcaaggacaatggggctcctctcaacag ccttcattctttggtttgtccaccaggggagggcaagatcttgatggaaatggctatcca gatctgattgtaggtgcatttggtgtggataagactttggtttacagggggcgtccaatt attcatgccagtgcctctctctccatctcccctaacatgtttaacccagaggagaagacc tgtacaattgaaggaaatgccagtgcagtatcctgcataaaccttagtttctgcttgaat gcttcagggaagcacgtgcctaactctattgggattaaagttgagctacagctggaccag atgaagcagaagggagcggtgaagcgagcgctgttcctgaaatcccgccagccccaactg acccaaactattcatttactgaatggaagcaaagaggaatgtcgtgccatgaagatctac ctcagggaggagtcagagttccgggacaagctctctccaatttacattggtctaaatttt tctctggacccactggcaccagctgatgcccatggtctcatgcccatcttcaattacaag accaagaactatattgagcagaaggctcagatccagctggactgtggggaagataacatc tgtgtgccagatctgaagctcaatgtctcaggtgaccggaaatctgtatatcttggggac gaaaacttcttgacattgttcttcagtgctcagaacctggggggaggagcctacgaggcg gaactttatgtcacattgcccccagaggcagagtacagtggcatagtgaggaacaatgag aatctcttgattttaccttgtgcttatgagatggagaatcagacccggctggtcatctgt gaccttggaaacccaatgaagacaggggccagtcttgccgggggtctaagattcacagtg ccacatctgcgggattccagccataaggtgcagtttgactttcaaatccgcagcaaaaat caaaataattcccaaagtgagacggtgcacttggcgttgaatgttgaagcccaaagtaca gtgtcgttttttggcgcctcaaagccagacagtgtaatcttccctgttgcaaactggaaa ccaggcaggaatcccatgacggggcaagaggcaggtccggaggtcaaacatgtgtatgag ctggtcaacttcgggccaagttccatcagtcaaggaatcctggaactgagatgcccaatg agagtcaacaaggaatatgctatgtacatgatgtcttattctgtgcaaggtttgaccaac tgcacctccaatcacccagctaatgccctgcatctacagcattcacccacagaccagcca cctacgctgaatcccaaaactgtccatcacgtggaaagacgagacactgcccgacttatc tcaggagcatctaatgttttgaaatgcaatgaaccccatgtggactgcttccatctacac tgtaatgttgggtcactagagaaacaacagcgagccatcctgagggtaaatttcctcatc tgggccaacaccttcatgcagaaggaaaaccagggattcactcttcagtgtgaagcactc tatcatatacagaagctgccgtacaaaattcttcctcacgtgtatcctaaagggacacat caggtggatactgcagttcattgggccaaacctgaaagtagctatggagtcccactatgg atcattatattggctattctaattggacttcttctgcttgcgttgcttatatatgtcctg tataagctcggcttctttaaacgctcgttgccatatggaactgccatggaaaaagctgag ctcaagccccaggctgcatcagaggcttaa

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