Xenopus laevis (African clawed frog): 397870
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Entry
397870 CDS
T01010
Symbol
wdhd1.L, and1, ctf4, wdhd1
Name
(RefSeq) WD repeat and HMG-box DNA-binding protein 1
KO
K11274
chromosome transmission fidelity protein 4
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xla03036
]
397870 (wdhd1.L)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
397870 (wdhd1.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
Mcl1_mid
Beta-prop_THOC3
Beta-prop_WDR5
WD40
Ctf4_C
Beta-prop_WDR3_1st
HMG_WDHD1
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_Aladin
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_RIG_2nd
EIF3I
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_EML
eIF2A
HMG_box
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
Beta-prop_Vps41
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_WDR36-Utp21_1st
Beta-prop_IFT122_1st
Beta-prop_WDR41
Beta-prop_Nup120_160
DUF6476
Beta-prop_EDC4L
Motif
Other DBs
NCBI-GeneID:
397870
NCBI-ProteinID:
NP_001081495
Xenbase:
XB-GENE-1217712
UniProt:
Q2TAV8
LinkDB
All DBs
Position
8L:complement(86359981..86414168)
Genome browser
AA seq
1127 aa
AA seq
DB search
MPAIKKNMRYGHPEGHTDVCFDDSGNFLVTCGSDGDIRIWESLDDDDPKSISIGEKAYSF
ALKNGKVVTAASNNAIQLHTFPDGEPDGILTRFTTNANHVVFNTDGTRIAAGSGDFLVKV
LQVEDSTQQKTLRGHSAPVLSVSFDPKDIYLASASCDGSVRIWKISDQTCEAVLPLLEKC
NDVFNAKSICRLAWQPKSGKFVAIPVGKAVHLYDRDSLKNICTLSDDFITQPVNIVAWSP
CGQYLVAGSVDGCIVAWNIATKACLERIKHEKGYTICALAWHPHLPQIAYTDNEGNLGLL
EDVCQGDVKQPSAKVSSAETKDYDELFDGDDDEDFLNGDMIGHEGAVNDEDDDDNFTALT
GRPRNRGAIFDDDISSDVPSLKLVGNENPVVEDDQASSVQNFTSVASVKPSYNGPMPTPQ
QKPFQSGSTPVHLMHRFMVWNSVGVIRCYNDEQDNAIDVEFHDTSIHHAIHLTNSLNHTL
ADVSQEAVLLACESTEELASKLQCLHFSSWDTSKEWMVDMPKGENIQAICLGQGWVACAT
SALLIRIFSVGGVQKELISLFGPVVCMASHGEQLIVVYHRGMGFDGDQCLGVQLLELGKK
KKQVLHGDPLPLSRKSYLSWLGFTAEGSPCYVDSEGIVRLLNRSLGDTWVPICNTREHCK
GKSDHYWVVGIHENPQQVRCIPCKGSRFPPTLPRPAVAVLPFNLPYCQITTEKGQMEEQY
WRSQIFSNHSDYLSKHGYECDENFKAEAQKMQQELLMKMFALSCKLEREFRCMELAEFMT
QNVMNLAIKYASRSKRLILAQRLSEMALEKAAEQASAEQNEEEDEEEEDFRSRLTAGYSR
TATEWGDSRAKPVKQDQYEENNEEEMEEEEKEQEEALESNTPTANPFNKSVKTPDVSESK
LGAILSSNQGRVNPFKVSASQKSPAFASNSSRSTSILDNMGKFPRKPSASGSPSTSKSDS
VIIKPLAPKAKSKQGQATLFHSVQAKPTAKKTTEEKKAVPTPPKAAADIAENKKPKTGFQ
LWLDENRPSILSENAGLDESEIIKEGMSRFRMLTSEERMLWTEKAKGDSPGEDGADAKKR
KRPEQENMASNGCPQENTDSGIAAAKKHKPLGQSANNKLSAFAFKKE
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atgccagctataaagaagaatatgcgatatggccatccagaggggcatacagatgtctgt
tttgatgatagtggaaactttctggtaacttgcggcagtgatggagatatacgaatttgg
gaaagtttagatgatgatgatcccaagtcaattagtattggtgaaaaggcttattcattt
gctttaaaaaatggaaaagtagtcacagctgcctctaacaacgcaattcagttgcataca
tttccggatggagaacctgatggaattctaacccgttttacaaccaatgctaatcatgtt
gtttttaacactgatggcaccaggatagcagcaggttcaggggatttcttggtaaaggtt
ttgcaggtggaggacagcactcagcaaaaaactctcagagggcacagtgcacctgtatta
agtgtttcattcgatccaaaggatatctacttggcatctgcaagttgtgatggatcagtg
aggatctggaaaatctcagatcagacctgtgaagcagtcctgcctctgttagagaagtgc
aacgatgtctttaatgcaaagtctatatgtcgtctagcctggcaacctaaaagtggaaag
tttgttgccattcctgttggaaaagcagtccatctttatgacagagacagtttaaagaat
atctgtaccctatcagatgattttataacacagcccgttaacattgtggcctggtctcca
tgtggacagtacctggtggctggaagtgtggatggttgtattgtggcctggaatatagca
accaaagcatgtttggaaagaattaaacatgaaaaaggttacacgatttgtgctcttgcc
tggcatccacatctgccacagattgcctatacagacaatgaagggaacctaggactactg
gaagatgtctgtcaaggagatgtaaaacagcccagtgccaaagtttcaagtgcagaaacc
aaggattatgatgaactctttgatggtgatgatgatgaagattttcttaatggagacatg
attggacatgaaggggctgtaaatgatgaagatgatgatgacaatttcacagccttaact
ggacgtccgcgaaaccgaggagcaatatttgatgatgatatttcatcagatgttccatct
ctaaagctagttggtaatgaaaatccagtagtggaggatgatcaagctagtagtgtgcaa
aactttacatctgttgcttcagttaagccttcttataatggccccatgcccacacctcaa
caaaagcctttccagtctggctctacccctgtgcaccttatgcacagattcatggtgtgg
aattcagttggggttatccgatgttataatgacgaacaagacaatgcaattgatgtggaa
tttcatgacacttccatacatcatgccattcacctgacaaactcactaaaccatacccta
gctgatgtttctcaagaagcagttcttcttgcttgcgagagcacagaggaattagccagc
aaattgcagtgcctacacttcagctcctgggacactagtaaggagtggatggtggacatg
ccaaagggtgaaaacattcaagccatttgccttggacagggttgggtggcttgtgccaca
agtgcactcttaatccgtatattctcagttggaggtgttcagaaggagctgatcagtctt
tttggccctgttgtctgcatggccagccatggtgaacagctgattgtggtctatcataga
ggtatgggatttgatggagatcagtgccttggagtacagttactggagctgggtaaaaaa
aagaaacaagtcctgcatggagatccactgcctctctctaggaaaagttatctttcttgg
cttgggttcactgcagaaggtagcccatgttatgtggattcagaaggcatagtgcggttg
ctgaaccgaagccttggagacacatgggtccctatatgtaacaccagggagcattgtaag
gggaaatcagatcattattgggttgttggtatccatgagaaccctcagcaagtgagatgt
attccatgtaaaggttcaagattccccccaacactgcctcgtccagcagtagcagtcctg
cccttcaaccttccatactgtcaaatcacaacagagaaaggacaaatggaggaacagtac
tggcgctctcagatatttagtaatcactcagattatttgtctaaacatggttatgaatgt
gatgagaattttaaagctgaagcacagaaaatgcagcaggagctgctaatgaagatgttt
gctctgtcttgcaaactagagcgtgaattccggtgcatggagctggctgagttcatgact
cagaacgtgatgaacctggctattaagtatgcctctcgctccaaaagactaatattggcc
cagcggctcagtgaaatggctctagagaaggcagctgaacaggcatctgcagaacaaaat
gaagaagaggatgaagaggaggaagattttagaagtagacttactgctggatatagcaga
acagcaacagagtggggcgattcaagggcaaaaccagttaaacaagaccagtatgaggaa
aataatgaggaagagatggaagaagaggaaaaagaacaagaggaagcactagaaagcaac
accccgacagcaaaccctttcaacaaaagtgtaaaaaccccagatgtgtcagagtctaag
ttgggtgcaattctatccagcaaccaaggccgagttaatcctttcaaggtgtctgctagt
cagaaaagccctgcatttgcaagtaactcatctcgctctactagtatcttggataacatg
ggaaaatttccaaggaagccatcagctagtggaagtccatccaccagcaagtccgactct
gttattataaaacctctggctccaaaagcaaaatccaaacagggccaagctactttgttt
catagcgtccaagctaaacccactgcaaaaaaaacaacagaagaaaaaaaagctgttccc
acaccacccaaagctgctgcagacattgcagaaaacaaaaagcccaaaactggctttcag
ctatggctggatgaaaatcgaccaagtatcttgtctgaaaatgcaggacttgacgagtct
gaaatcattaaagaaggcatgagtcggtttcgtatgctcacatctgaagagagaatgctg
tggactgagaaagccaaaggagactcccctggagaagatggcgctgatgcaaaaaagcga
aaacgccctgagcaggagaacatggcatcaaatgggtgtccccaggaaaacacagatagc
ggcattgctgcagcaaagaaacacaaaccattaggccaatctgcaaataacaaattgtcg
gcatttgcctttaaaaaggagtaa
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integrated database retrieval system
