Xenopus laevis (African clawed frog): 397889
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Entry
397889 CDS
T01010
Symbol
42sp50.L, 42sp50, Thesaurin-A
Name
(RefSeq) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
397889 (42sp50.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xla03019
]
397889 (42sp50.L)
03016 Transfer RNA biogenesis [BR:
xla03016
]
397889 (42sp50.L)
03012 Translation factors [BR:
xla03012
]
397889 (42sp50.L)
04131 Membrane trafficking [BR:
xla04131
]
397889 (42sp50.L)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xla04147
]
397889 (42sp50.L)
Messenger RNA biogenesis [BR:
xla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
397889 (42sp50.L)
Transfer RNA biogenesis [BR:
xla03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
397889 (42sp50.L)
Translation factors [BR:
xla03012
]
Eukaryotic type
Elongation factors
397889 (42sp50.L)
Membrane trafficking [BR:
xla04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
397889 (42sp50.L)
Exosome [BR:
xla04147
]
Exosomal proteins
Proteins found in most exosomes
397889 (42sp50.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
Ras
GTP_EFTU_D4
G-alpha
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
397889
NCBI-ProteinID:
NP_001095231
Xenbase:
XB-GENE-5853356
UniProt:
P17506
A4FVE0
LinkDB
All DBs
Position
6L:153195418..153201763
Genome browser
AA seq
463 aa
AA seq
DB search
MTGKAPQKTHLNIVIIGHVDSGKSTTTGHLIYKCGGFDPRALEKVEAAAAQLGKSSFKFA
WILDKLKAERERGITIDISLWKFQTNRFTITIIDAPGHRDFIKNMITGTSQADVALLVVS
AATGEFEAGVSRNGQTREHALLAYTMGVKQLIVCVNKMDLTDPPYSHKRFDEVVRNVMVY
LKKIGYNPATIPFVPVSGWTGENISSPSQKMGWFKGWKVKRKDGFTKGQSLLEVLDALVP
PVRPANKPLRLPLQDVYKIGGIGTVPVGKIETGILKPGMTISFAPSGFSAEVKSIEMHHE
PLQMAFPGFNIGFNVKNIAVKSLKRGNVAGNSKSDPPTEASSFTAQVIILNHPGFIKAGY
SPVIDCHTAHITCQFAELQEKIDRRTGKKLEDNPGLLKSGDAAIITLKPIKPFCVERFFD
YPPLGRFAARDLKQTVAVGVVKSVEHKAGAAARRQVQKPVLVK
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgactggcaaagctcctcagaagactcacttgaacattgtgattattggacatgttgat
tctgggaaatccaccaccaccggacacctcatctacaagtgcgggggctttgaccccagg
gccctggagaaggtggaggcggctgctgctcagcttggcaagagctccttcaagtttgcc
tggatcctggataagctgaaggctgagagggagcgaggaatcaccatcgacatctcccta
tggaagttccagaccaacaggttcacaatcaccataatcgatgccccggggcacagggac
ttcattaagaacatgatcacaggcacctctcaggcagatgttgctctcctggtggtctct
gcggctacaggggaatttgaggccggtgtgtccagaaatggccaaacaagggaacacgct
cttctggcctacaccatgggggtcaagcaactgatcgtctgcgtgaacaaaatggatctg
acggaccctccctacagccacaagagatttgatgaagttgtcaggaatgtgatggtctat
ctgaaaaagattgggtacaacccggctaccatccccttcgtgcccgtgtctggctggacg
ggagagaatatatcttcgcccagtcaaaagatgggttggtttaaaggttggaaggtgaaa
cgaaaagatggctttacaaagggccaatccctcttggaggttctggatgcgcttgtacct
ccagtgaggccggcaaataagcctttgcggctccccctgcaggatgtatacaagataggg
ggcattggtacagtccctgtgggcaagatagaaactgggattctgaagccaggcatgacc
atctcctttgcaccgtctggtttctcagctgaagttaaatccatagaaatgcaccacgag
ccgcttcagatggccttcccagggttcaacatcggattcaatgtcaagaacattgctgtg
aaaagtctaaagcgtggcaatgtggcgggcaattcaaagagtgacccaccgactgaggcc
tccagcttcactgcccaggtgatcattctgaaccacccgggctttatcaaagccggatat
tcaccggttatcgactgtcacactgcacacatcacatgccagtttgcagaactgcaggaa
aagattgacaggcggactggcaaaaagctagaggacaacccggggctactgaaatctgga
gatgccgccatcataaccctgaagcccatcaagcccttctgtgtggagaggttctttgat
tatccacctctagggaggtttgcagcccgagacctaaaacagactgttgccgtcggggtt
gtgaagtcggtggagcacaaagctggagctgctgccaggagacaagtccaaaaaccagtg
ttggtgaagtga
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