Xenopus laevis (African clawed frog): 397942
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Entry
397942 CDS
T01010
Symbol
thra.L
Name
(RefSeq) thyroid hormone receptor alpha-A isoform X1
KO
K05547
thyroid hormone receptor alpha
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04080
Neuroactive ligand-receptor interaction
xla04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
397942 (thra.L)
04081 Hormone signaling
397942 (thra.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
397942 (thra.L)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
xla03310
]
397942 (thra.L)
Transcription factors [BR:
xla03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
397942 (thra.L)
Nuclear receptors [BR:
xla03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
397942 (thra.L)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
397942
NCBI-ProteinID:
XP_018089633
Xenbase:
XB-GENE-5966552
UniProt:
P15204
A0A974BW62
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Position
9_10L:complement(1863574..1951134)
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AA seq
418 aa
AA seq
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MDQNLSGLDCLSEPDEKRWPDGKRKRKNSQCMGKSGMSGDSLVSLPSAGYIPSYLDKDEP
CVVCSDKATGYHYRCITCEGCKGFFRRTIQKNLHPSYSCKYDGCCIIDKITRNQCQLCRF
KKCIAVGMAMDLVLDDSKRVAKRKLIEENRQRRRKEEMIKTLQQRPEPSSEEWELIRIVT
EAHRSTNAQGSHWKQRRKFLPEDIGQSPMASMPDGDKVDLEAFSEFTKIITPAITRVVDF
AKKLPMFSELTCEDQIILLKGCCMEIMSLRAAVRYDPDSETLTLSGEMAVKREQLKNGGL
GVVSDAIFDLGRSLAAFNLDDTEVALLQAVLLMSSDRTGLICTDKIEKCQETYLLAFEHY
INHRKHNIPHFWPKLLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFEDQEV
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggaccagaatctcagcgggctggactgcttgtcagagccagatgaaaaaaggtggccg
gatgggaagcgaaaaagaaagaacagccaatgtatgggaaaaagcggcatgtccggtgac
agcttggtgtctctgccctctgcagggtacatccccagctatctggacaaagatgagcca
tgcgtggtgtgcagtgataaggccacggggtaccactaccgctgtatcacttgcgagggg
tgtaagggtttctttcgccgcaccatccagaagaacctgcacccctcctactcgtgcaag
tacgatggctgctgcattatcgacaagatcacccgaaatcagtgccagctctgccgcttc
aagaaatgcattgccgttggcatggcaatggatcttgtcctggatgatagcaagcgggta
gccaagcgaaaactgattgaagagaatcgacagcggcggcggaaggaggagatgatcaag
actctgcaacagcgtcccgagccaagcagcgaggagtgggagttgattcgcattgtaaca
gaagctcacaggagtaccaatgctcagggcagccactggaaacagcgtaggaagtttctg
ccggaagatatcgggcagtctcccatggcttccatgccggatggggataaagttgacctg
gaagctttcagtgagttcaccaagataatcaccccggcaattaccagagtggtggacttt
gccaagaagctgcccatgttctctgagctgacttgtgaagaccagatcatcctgttgaaa
ggatgttgtatggagatcatgtctctccgtgctgctgtacgctacgatccagacagcgag
accctaacgctgagcggagagatggctgtgaaacgggagcagcttaagaacggaggtctg
ggtgttgtctctgatgccatctttgacctcgggaggtcgcttgctgcgtttaaccttgac
gatacggaagtggcactgctgcaggctgttttgctaatgtcatcagaccgaactggttta
atctgcacggacaagatagagaaatgtcaagagacctaccttctcgcctttgaacactac
atcaaccatcgcaaacacaacattccccacttctggcccaaactcctaatgaaggtgacg
gacctgcgcatgataggggcatgccatgccagccgctttctgcacatgaaggtcgagtgc
cccaccgagctctttccaccgctcttccttgaggtctttgaggaccaggaagtttga
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