Xenopus laevis (African clawed frog): 397959
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Entry
397959 CDS
T01010
Symbol
lhx3.L, lhx3, LIM-3, lim3, xlim-3
Name
(RefSeq) LIM/homeobox protein Lhx3
KO
K09374
LIM homeobox protein 3/4
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
397959 (lhx3.L)
Transcription factors [BR:
xla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
397959 (lhx3.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
SARA_C
Orbi_VP3
Furin-like_2
Motif
Other DBs
NCBI-GeneID:
397959
NCBI-ProteinID:
NP_001081623
Xenbase:
XB-GENE-865930
UniProt:
P36200
B7ZPU9
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All DBs
Position
8L:complement(3988204..4002145)
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AA seq
395 aa
AA seq
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MLLERVRTGTQKSSDMCGYTGSPEIPQCAGCNQHIVDRFILKVLDRHWHSKCLKCNDCQI
QLAEKCFSRGDSVYCKDDFFKRFGTKCAACQQGIPPTQVVRRAQEFVYHLHCFACIVCKR
QLATGDEFYLMEDSRLVCKADYETAKQREAESTAKRPRTTITAKQLETLKNAYNNSPKPA
RHVREQLSSETGLDMRVVQVWFQNRRAKEKRLKKDAGRQRWGQYFRNMKRSRGNSKSDKD
SIQEEGPDSDAEVSFTDEPSMSEMNHSNGIYNSLNDSSPVLGRQAGSNGPFSLEHGGIPT
QDQYHNLRSNSPYGIPQSPASLQSMPGHQSLLSNLAFPDTGLGIIGQGGQGVAPTMRVIG
VNGPSSDLSTGSSGGYPDFPVSPASWLDEVDHTQF
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgcttcttgagcgagtaaggaccggcacgcagaagtcatcggacatgtgtggatatacg
ggcagcccagaaatccctcagtgtgcaggctgcaatcagcacattgtagatcgtttcatc
ctaaaggttctcgacaggcactggcacagcaaatgcttaaaatgtaacgactgtcagatc
caactggcagagaaatgtttcagccgaggggacagtgtgtactgcaaagacgactttttt
aagagatttgggaccaaatgtgcagcctgccaacaaggaatcccccccacccaggtggtg
aggagagcccaggagtttgtgtatcatcttcactgctttgcttgcattgtatgcaaaagg
cagctggccactggggatgagttttacctcatggaggacagcaggctggtgtgcaaggca
gattacgagacagcaaaacagagagaggcagaatcgactgcaaagaggccaagaaccaca
atcactgcaaaacagttggaaactctgaaaaatgcctataacaactctccaaaacctgcc
agacatgtccgagagcagctttcctctgagactggcttggatatgagggtggtacaggtc
tggttccagaacagacgagcgaaagaaaagagactaaagaaagatgctggaaggcaaaga
tggggccagtatttcagaaacatgaaaagatcgagggggaattctaaatctgacaaagat
agtatccaggaggaaggtcctgatagtgatgctgaagtttcattcacagatgaaccctct
atgtctgaaatgaatcactccaacgggatttataacagcttgaacgattcatctcctgtt
ttgggcagacaagctggaagcaatggtcctttttccctagaacatggtggaatccccact
caggatcaatatcacaatctgaggtcaaacagtccatatggaatccctcagtcccctgca
tcactacagtcaatgccaggtcaccagtctttgctctcaaacttggcattcccagacact
gggttgggaataattggtcaaggaggacaaggagttgccccaacaatgagagtaataggg
gtaaacggaccaagttctgacctttccaccggtagcagtggtggatatccagattttcct
gtaagcccggcctcttggttggatgaggttgaccacactcagttttga
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