KEGG   Xenopus laevis (African clawed frog): 397963
Entry
397963            CDS       T01010                                 
Symbol
ercc5.L, cofs3, ercc5, ercm2, uvdr, xpg, xpgc
Name
(RefSeq) DNA repair protein complementing XP-G cells homolog
  KO
K10846  DNA excision repair protein ERCC-5
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:xla00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    397963 (ercc5.L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xla03400]
    397963 (ercc5.L)
DNA repair and recombination proteins [BR:xla03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     397963 (ercc5.L)
SSDB
Motif
Pfam: XPG_N XPG_I
Other DBs
NCBI-GeneID: 397963
NCBI-ProteinID: NP_001081629
Xenbase: XB-GENE-960384
UniProt: Q6DDY8
LinkDB
Position
2L:124456417..124480447
AA seq 1197 aa
MGVQGLWKLLECSGRPINPGTLEGKILAVDISIWLNQAVKGARDRQGNAIQNAHLLTLFH
RLCKLLFFRIRPIFVFDGEAPLLKRQTLAKRRQRTDKASNDARKTSEKLLRTFLKRQAIK
AALSGNKQSNEELPSFSQVPRKETEDLYILPPLEDNENNSSEEEEEREWEERMNQKQRLQ
EDFFANPSSVDIESEEFKSLPPEVKHEILTDMKDFTKRRRTLFEAMPEDSSDFSQYQLKG
LLKKNDLNKCIDNVRKELNQQYSGEVQAQFESEGGFLKEVETRRLVSEDDSHYILIKGIQ
SKQEEKKVDSPPQSITFNSSQTPKTYLDLKLASAHKTKPLQTSSAEAAPPSPRTLFAIQE
AMAESWDHEKHEKPSVSGCEAEGNVSPRTLQAIYQVLAEDEAGESNKIKVVLQSDEERKP
KTKVLVISSSDEEDDCLNYQDGTKTTLGASLIKSISPSSMQCQESTADSLPNYTRSKPVS
QIEEPMADHNLQGDNCNVPNAKDKLIVPPSLGNVDKPIILSNTIPVNSEFRIPLLPVNMS
MRETVIIPNNPGSLGSSRYISLERDATKQGFSDNPVGDLVRSPDEPALNASSALSDRKTS
ATQSLLCNNIECTEQSMVQGCSNTLDVTQATQPSGGSEVNKPAEYNPQVKKVFGSNDSSA
MYVPMTPESIIVSDEEFVNEKKEDSDSDDSFIEVDSEFSTSNSQHVVFKEPGDTRETATN
FQAVEEGNSGSQDIPLEHDSGEPHEQSNSEESKDLDDVSNEWQDISVEELESLENNLYVQ
QTSLQAQRQQQERIAATVTGQMCLESQELLQLFGIPYIVAPMEAEAQCAILDLTDQTSGT
ITDDSDIWLFGARHVYKNFFSQNKHVEYYQYADIHNQLGLDRSKLINLAYLLGSDYTEGI
PTVGYVSAMEILNEFPGQGLEPLVKFKEWWSEAQKDKKMRPNPNDTKVKKKLRLLELQQS
FPNPAVASAYLKPVVDESKSAFSWGRPDLEQIREFCESRFGWYRLKTDEVLLPVLKQLNA
QQTQLRIDSFFRLEQHEAACLKSQRLRRAVTCMKRKERDVEAEEVEAAVAVMERECTNQR
KGQKTNTKSQGTKRRKPTECSQEDQDPGGGFIGIELKTLSSKAYSSDGSSSDAEDLPSGL
IDKQSQSGIVGRQKASNKVESSSSSDDEDRTVMVTAKPVFQGKKTKSKSMKETVKRK
NT seq 3594 nt   +upstreamnt  +downstreamnt
atgggagttcaaggactttggaagcttttggagtgttcgggaagaccaattaatccagga
acactagaaggaaaaatccttgctgttgatatcagcatttggctcaatcaagctgtaaaa
ggtgctagagaccgacaaggaaatgctatccaaaatgctcatttactgaccttattccac
cggctttgcaagctcttatttttcagaattcgacctatatttgtgtttgatggagaagct
cctttgctgaagagacaaactcttgcaaaaaggaggcagagaacagacaaggcaagtaat
gatgcaaggaaaacaagtgaaaagctgctgagaaccttcttgaaaagacaagcaataaaa
gctgccctatcaggaaataagcagagcaatgaagaattgccaagcttctcccaagttcct
aggaaggagactgaagacttgtatattctgcctccgttggaagataatgagaacaatagc
tctgaagaagaggaggagagagaatgggaggaaagaatgaatcaaaaacagaggctgcag
gaagatttttttgccaatcccagctctgtggatatagaatctgaagagttcaaaagcctt
cctccagaggtaaagcatgagatcctgactgacatgaaggattttacaaaaagaaggaga
acattgtttgaagccatgcccgaggattccagcgatttctcccagtaccagctgaaaggt
ctgctgaaaaaaaacgatctgaacaagtgcattgataacgtgcgaaaggagctgaaccag
cagtactctggggaagtccaagctcagtttgagtccgaaggaggctttctgaaagaggtg
gaaacccgccgtctggtctctgaggacgattctcattacattctaattaaaggaattcag
tcaaaacaggaagagaaaaaagttgattctcctccacagtccattacctttaattcctct
caaactcccaaaacgtaccttgatttaaaactagcttctgctcacaaaacaaaaccttta
caaaccagttctgctgaagcagcacccccttctccaaggacactctttgctatccaagag
gcaatggcggagagctgggatcatgaaaaacacgagaagccttctgtgtctggctgtgaa
gcagaagggaatgtatcacccaggaccctacaagcaatttatcaggttcttgcagaggat
gaagcaggggagagtaataagataaaggtggttctgcaaagtgatgaagagaggaaacct
aaaacaaaggtactagtaataagcagttcagatgaagaggatgattgcttaaactatcag
gatggaacaaaaactactcttggagcctctttaataaagagtatttcacccagttctatg
cagtgtcaagaatctactgcagacagtctgccgaactacacacgttctaaacctgtctca
caaatagaggagccaatggctgaccataatctgcaaggtgataattgtaatgtccctaat
gccaaagataaattaattgttccaccttcgttgggcaatgttgacaaacctattattttg
agtaacacgattccagttaattctgaattccgaatcccgttacttcctgtgaatatgagc
atgcgagaaactgtaataattcctaacaaccctggtagcttgggctcttccagatatatt
agcctagaaagagatgccacaaagcaaggtttttctgacaatccagttggggatttagtg
aggagtccagatgaacctgccctgaacgcctcatcagccttgagtgaccgcaaaacctct
gctactcagtcgttattatgtaacaacatcgagtgcacggagcaaagtatggttcaaggt
tgtagtaataccctggatgttacacaggctacgcaaccttcaggaggatcagaggtgaat
aaacctgcagagtacaatccacaggttaagaaagtatttggcagcaatgactcaagtgcc
atgtatgtgccaatgacccctgaaagtataattgttagtgatgaggagtttgttaatgag
aagaaggaggactctgattcagatgacagtttcattgaagtggacagtgaatttagcact
agcaactcccaacatgtggtatttaaagagccaggagatacacgtgaaactgcaactaac
tttcaggcagttgaagaaggtaattctggaagtcaagacatcccccttgaacatgatagt
ggagaaccacatgaacagtcaaacagtgaagagtcgaaagatttggatgacgttagcaac
gaatggcaagacattagtgtggaggaacttgaatcacttgagaacaatctgtatgttcag
caaacatctctccaagctcagcggcaacagcaggaacgtatagctgccactgttacagga
cagatgtgcctagaaagccaggagttgctacagttgtttggcatcccatacattgtagcc
cccatggaggcagaagctcagtgtgccatcttggatcttactgaccaaacatccggaaca
atcacagatgatagtgatatatggctttttggggcacgacatgtgtacaagaatttcttt
tctcaaaataaacacgttgagtactaccagtatgcggatattcacaatcagcttggttta
gaccggtcaaagctaataaatttagcatacttgttgggaagtgattacacagaagggatc
ccgacagtcggttacgtgtcggctatggaaatcctgaacgagttccctgggcaaggcctg
gaacctcttgtaaagtttaaagaatggtggagtgaagctcaaaaggataagaaaatgagg
cctaatccaaacgatactaaagtgaaaaagaaactgcggctcttggagctccagcagagc
tttccaaatccagctgtagccagtgcatatctaaagcctgtggtggatgaatcaaaaagt
gctttctcctggggacgaccagacctagaacagatcagagaattctgtgagagccgcttt
ggctggtatcggttaaagactgatgaagtgctgctgccggtgctgaagcaattaaatgca
caacagactcagcttcgaatagattcatttttcaggttggaacagcatgaagccgcttgt
ttaaagagccagcgattgcgcagggctgtaacttgcatgaaaagaaaggaaagagacgtg
gaagcagaagaagtagaagcagctgttgcagtcatggagagagaatgcacaaatcaacgt
aaaggtcaaaagacaaatacaaaatcccaaggtacgaaaaggagaaagccaacagaatgt
tctcaggaggatcaggatcctggagggggatttattggcattgagttgaaaacgttatct
tctaaagcatattcttcagatggatccagcagtgatgcagaagacctgccctctggccta
attgataagcagagtcaaagtggcatagttggcagacaaaaagcaagtaacaaagtagaa
agtagtagttcaagcgacgatgaagacagaacagtcatggttacggcaaaacctgtattt
cagggcaaaaaaactaaatcaaaatctatgaaagaaactgtgaaaagaaaatga

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