| Entry |
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| Symbol |
sox17a.L, sox17, sox17-alpha, sox17.L, sox17a, sox17a-a, sox17a1, Sox17alpha, tSox17alpha, xsox17, xsox17-alpha, xsox17a
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| Name |
(RefSeq) transcription factor Sox-17-alpha-A
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| KO |
| K04495 | transcription factor SOX17 (SOX group F) |
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| Organism |
xla Xenopus laevis (African clawed frog)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:xla00001]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
397966 (sox17a.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:xla03000]
397966 (sox17a.L)
Transcription factors [BR:xla03000]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
397966 (sox17a.L)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
6L:122899051..122901477
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| AA seq |
380 aa
MSSPDGGYASDDQNQGKCSVPIMMTGLGQCQWAEPMTSLGEGKLKSDAGSANSRSKAEAR
IRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKSLTLAEKRPFVEEAERLRVQ
HMQDHPNYKYRPRRRKQVKRMKRAENGFMHMAEAQESAVLGADGRMCLENFSLGYHEQTY
SHGQVPQSSHYREPQAVAPHYDGYSLPTPESSPLDLAEADPVFFTSPAQDECQMMPYSYN
GSYPHQQNSMLVRQMPQTEQMGQVSPVQGMMACQSSPHMYYGQMYLPGSARHHQLHQAGQ
PSPPPEAQQMGRADHIQPADMLAEVDRTEFEQYLSYVAKSDLGMHYHAQESVVPTADNGP
ISSVLSDASTAVYYCNYPSA |
|---|
| NT seq |
1143 nt +upstreamnt +downstreamnt
atgagcagccctgatggtggttacgccagcgacgatcagaatcagggaaagtgctcagtg
ccaataatgatgactggactcgggcagtgccagtgggccgaacccatgacttctctcggg
gaggggaaactgaagagcgatgcgggatctgccaattctaggagcaaagccgaggctcgg
atccgccggcctatgaatgccttcatggtgtgggcaaaggacgagcgcaagagactggca
cagcagaaccccgacctgcacaacgccgagctcagcaagatgcttggcaagtcgtggaag
tctctgactctggcagagaagcgcccctttgtggaggaagcagagaggctgagggtgcag
cacatgcaggaccaccccaactacaagtacagaccccgcaggaggaaacaggtgaagagg
atgaagagggcagaaaacggcttcatgcacatggcagaggcgcaggagagcgcagtgctg
ggcgcagatggaaggatgtgtctagagaacttcagcctgggttatcatgagcagacttac
tcccacggccaggttcctcagagcagccactacagggaaccccaagcagtggctccccat
tatgacggttacagtttgcccactcctgagagctctcctctggatttggcagaagcagat
cccgtgttcttcacatctccagcccaggacgagtgccagatgatgccctacagctacaat
ggcagctaccctcaccagcagaactccatgttggtaagacagatgccacaaactgagcaa
atgggtcaagtcagtccagttcagggtatgatggcatgtcagagctccccacacatgtac
tatggacagatgtacttgccaggctctgccaggcatcaccagctccaccaagctgggcag
ccctccccaccccctgaggctcagcagatgggcagagcagatcacatccaaccggctgac
atgttggcagaggtggacaggactgaattcgagcagtatctgagctatgtggccaagtca
gacctgggtatgcattatcatgcgcaggaatcggtggtgcctactgcagacaatgggccc
atttcttctgtcctttccgatgccagtactgctgtatattactgcaactaccccagtgcc
tga |
|---|
