Entry |
|
Symbol |
sox17b.1.S, sox17, sox17-beta, sox17b, sox17b.1, sox17b.1-a, Sox17beta, tSox17beta, Xsox17, xsox17-beta, XSox17beta
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Name |
(RefSeq) transcription factor Sox-17-beta.1
|
KO |
K04495 | transcription factor SOX17 (SOX group F) |
|
Organism |
xla Xenopus laevis (African clawed frog)
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Pathway |
|
Brite |
KEGG Orthology (KO) [BR:xla00001]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
397967 (sox17b.1.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:xla03000]
397967 (sox17b.1.S)
Transcription factors [BR:xla03000]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
397967 (sox17b.1.S)
|
SSDB |
|
Motif |
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Other DBs |
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LinkDB |
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Position |
6S:100725422..100727882
|
AA seq |
373 aa
MSSPDCGYSSDDQIQGSCSVPMMMGQYQWTEPLTVFQDLKPKRDEGSADSRSKAEGRIRR
PMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKSLTLATKRPFVEEAERLRVQHIQ
DYPDYKYRPRRKKQVKRMKREEDGFLPSANFPGSQIMDNNVMVGENYRMQYSAQNHQQNQ
LPPAGYFEGHNSIGYYYRDYSVPNYHISQNSSGYDSPPAQDEYQALSYSFNSSYMPYQQN
ATTPVMAKQMAVTQNIPQESPEHGMMASPQMYNRQMYVSECAKTHPMAQTEQHFPSYQSQ
KMVRQNYLQSQQDGHLESDIDKTEFDQYLMYEPKADMEIIYTIDQDSGAYSTNLLPSLIT
EANNVCYYDYCGV |
NT seq |
1122 nt +upstreamnt +downstreamnt
atgagcagcccggactgcggctactccagcgacgatcagattcagggaagctgctcagtg
ccgatgatgatgggccagtatcaatggaccgaacccctgaccgtgtttcaggacctcaaa
cccaagagggatgaaggatctgccgattccagaagcaaagccgagggtcggatccgccga
cccatgaatgcctttatggtgtgggcaaaggacgagcgcaagaggctggcgcaacagaac
cccgacctgcacaacgccgagctcagcaagatgcttggtaaatcatggaaatcccttact
ctggcaactaaacgcccctttgtggaagaagctgagaggctgagggtgcagcatatccag
gactatcctgattacaaatacagaccccgcaggaagaagcaggtgaagaggatgaagagg
gaagaggatggattccttcccagtgcaaacttcccaggatctcagataatggacaacaat
gtcatggtaggagagaactataggatgcagtattctgcgcagaaccaccagcagaaccaa
ctcccaccagcaggctactttgagggccacaactcaattggatactattacagagattac
agtgtacccaactaccacatttcccagaacagctctggctacgacagcccccctgcacaa
gatgagtaccaagcattgtcttacagtttcaacagcagctatatgccctaccagcagaat
gctactaccccagtgatggctaaacagatggcagttacccagaacattccccaggaaagc
cctgaacatggcatgatggcttctccacaaatgtacaacagacaaatgtatgtatcagag
tgtgccaaaacccacccaatggcacagactgagcagcatttcccttcatatcagtcccag
aagatggtcagacagaattatctacagagccagcaagatgggcatctggagagtgacatt
gacaagactgagttcgaccagtaccttatgtatgagcccaaggctgatatggagatcatc
tataccattgaccaggacagtggtgcttatagtacaaacctcctgccatctttaatcaca
gaggcaaacaatgtctgctactatgactattgtggcgtataa |