KEGG   Xenopus laevis (African clawed frog): 397967
Entry
397967            CDS       T01010                                 
Symbol
sox17b.1.S, sox17, sox17-beta, sox17b, sox17b.1, sox17b.1-a, Sox17beta, tSox17beta, Xsox17, xsox17-beta, XSox17beta
Name
(RefSeq) transcription factor Sox-17-beta.1
  KO
K04495  transcription factor SOX17 (SOX group F)
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla04310  Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:xla00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    397967 (sox17b.1.S)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:xla03000]
    397967 (sox17b.1.S)
Transcription factors [BR:xla03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    397967 (sox17b.1.S)
SSDB
Motif
Pfam: HMG_box HMG_box_2 HTH_24
Other DBs
NCBI-GeneID: 397967
NCBI-ProteinID: NP_001081633
Xenbase: XB-GENE-6252148
UniProt: O42601 A0A974CJU6
LinkDB
Position
6S:100725422..100727882
AA seq 373 aa
MSSPDCGYSSDDQIQGSCSVPMMMGQYQWTEPLTVFQDLKPKRDEGSADSRSKAEGRIRR
PMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKSLTLATKRPFVEEAERLRVQHIQ
DYPDYKYRPRRKKQVKRMKREEDGFLPSANFPGSQIMDNNVMVGENYRMQYSAQNHQQNQ
LPPAGYFEGHNSIGYYYRDYSVPNYHISQNSSGYDSPPAQDEYQALSYSFNSSYMPYQQN
ATTPVMAKQMAVTQNIPQESPEHGMMASPQMYNRQMYVSECAKTHPMAQTEQHFPSYQSQ
KMVRQNYLQSQQDGHLESDIDKTEFDQYLMYEPKADMEIIYTIDQDSGAYSTNLLPSLIT
EANNVCYYDYCGV
NT seq 1122 nt   +upstreamnt  +downstreamnt
atgagcagcccggactgcggctactccagcgacgatcagattcagggaagctgctcagtg
ccgatgatgatgggccagtatcaatggaccgaacccctgaccgtgtttcaggacctcaaa
cccaagagggatgaaggatctgccgattccagaagcaaagccgagggtcggatccgccga
cccatgaatgcctttatggtgtgggcaaaggacgagcgcaagaggctggcgcaacagaac
cccgacctgcacaacgccgagctcagcaagatgcttggtaaatcatggaaatcccttact
ctggcaactaaacgcccctttgtggaagaagctgagaggctgagggtgcagcatatccag
gactatcctgattacaaatacagaccccgcaggaagaagcaggtgaagaggatgaagagg
gaagaggatggattccttcccagtgcaaacttcccaggatctcagataatggacaacaat
gtcatggtaggagagaactataggatgcagtattctgcgcagaaccaccagcagaaccaa
ctcccaccagcaggctactttgagggccacaactcaattggatactattacagagattac
agtgtacccaactaccacatttcccagaacagctctggctacgacagcccccctgcacaa
gatgagtaccaagcattgtcttacagtttcaacagcagctatatgccctaccagcagaat
gctactaccccagtgatggctaaacagatggcagttacccagaacattccccaggaaagc
cctgaacatggcatgatggcttctccacaaatgtacaacagacaaatgtatgtatcagag
tgtgccaaaacccacccaatggcacagactgagcagcatttcccttcatatcagtcccag
aagatggtcagacagaattatctacagagccagcaagatgggcatctggagagtgacatt
gacaagactgagttcgaccagtaccttatgtatgagcccaaggctgatatggagatcatc
tataccattgaccaggacagtggtgcttatagtacaaacctcctgccatctttaatcaca
gaggcaaacaatgtctgctactatgactattgtggcgtataa

DBGET integrated database retrieval system