Xenopus laevis (African clawed frog): 397968
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Entry
397968 CDS
T01010
Symbol
psmc5.S, psmc5, sug-1, sug1, tbp10, xsug1
Name
(RefSeq) 26S proteasome regulatory subunit 8
KO
K03066
26S proteasome regulatory subunit T6
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
397968 (psmc5.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
xla03051
]
397968 (psmc5.S)
Proteasome [BR:
xla03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
397968 (psmc5.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
AAA_2
AAA_5
AAA_22
AAA_16
AAA_lid_PRS2_C
RuvB_N
PRS7_OB
nSTAND3
TIP49
AAA_18
NPHP3_N
AAA_28
Mg_chelatase
AAA_3
AAA_33
Parvo_NS1
PhoH
AAA_14
ATPase
FapA
AAA_17
IstB_IS21
HR1
AAA_24
DUF815
AAA_25
AAA_7
Sigma54_activat
ABC_tran
RNA_helicase
APG6_N
Zeta_toxin
AAA_19
AAA_11
TsaE
DUF5906
Motif
Other DBs
NCBI-GeneID:
397968
NCBI-ProteinID:
NP_001081635
Xenbase:
XB-GENE-17338635
UniProt:
P46470
LinkDB
All DBs
Position
9_10S:complement(6840826..6851701)
Genome browser
AA seq
461 aa
AA seq
DB search
MEQMEMDESRGGTGLRQYYLSKIEDLQLVVNDKSQNLRRLQAQRNELNAKVRLLREELQL
LQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHK
ILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPEHFEALGIAQPKG
VLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSI
IFMDEIDSIGSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALL
RPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEA
GMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKKLWKCFFLVPILCSTVCFQLKPSD
VYYMGAWLIKPTRFNRRIITNSYHLQIFKPTIVLANGECHN
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggagcagatggagatggacgagtcccgtggaggaactggtctgcgtcagtattactta
tccaaaattgaagacctgcagctcgttgtcaatgataagagtcagaatctgaggcgcctg
caagcgcagaggaatgaactgaacgctaaagtgcggctgctgagagaggagctgcagctg
cttcaagagcagggatcctacgtaggagaagtggtcagagctatggacaagaagaaagtg
ttggtcaaggttcacccggagggaaagtttgttgtggatgttgataagaatattgacatc
aatgatgttacaccaaactgtcgagttgctttgcgcaatgacagttacacactacataaa
attctgcccaacaaggtggaccccttagtgtctctgatgatggtggagaaagtcccagac
tccacgtatgagatgatcggtggcttggataaacagatcaaggagatcaaggaggtcatt
gaactgcccgtgaaacacccagagcactttgaagcattgggtatagcacagcccaagggt
gtgttgctgtacggacctccaggtactggaaagacacttctggctcgtgctgtggcccat
cacacagactgcacatttatacgagtgtctggctccgaactggtgcagaagttcatcgga
gagggtgctcgtatggtgcgtgaactctttgttatggctcgggaacatgctccctccatt
atctttatggacgaaatcgattcgattgggtctcggctcgaggggggctcgggaggagac
agcgaggtccagcgcacaatgcttgagctgctcaatcaactggacggatttgaggcaaca
aagaacataaaggtaatcatggcaactaacagaattgatatattggactctgctctgctg
cgcccaggtcgcattgacaggaagatcgagttcccgcctcctaatgaagaggcccgtctg
gacattttgaagattcactcaagaaaaatgaacttgacgcgtgggatcaacctgcgcaaa
atagcagaactgatgcccggggcatcaggggccgaagtgaagggggtgtgcacagaggcg
ggaatgtatgctctccgtgagaggcgggtgcacgtcacacaagaggactttgaaatggct
gtagcaaaggtgatgcagaaggacagtgagaagaacatgtccattaagaagctgtggaag
tgtttttttttggttcccatcctgtgttctacagtttgcttccagctgaagccctcagat
gtctattatatgggagcatggctcattaaacccacaagattcaacagaagaatcatcacc
aactcctatcatctacagatcttcaagcccacgatagttttggctaacggggaatgccac
aactag
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