KEGG   Xenopus laevis (African clawed frog): 397973
Entry
397973            CDS       T01010                                 
Symbol
polb.S, polb
Name
(RefSeq) DNA polymerase beta
  KO
K02330  DNA polymerase beta [EC:2.7.7.7 4.2.99.-]
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:xla00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    397973 (polb.S)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xla03400]
    397973 (polb.S)
Enzymes [BR:xla01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     397973 (polb.S)
DNA repair and recombination proteins [BR:xla03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     397973 (polb.S)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    X-family DNA polymerases
     397973 (polb.S)
SSDB
Motif
Pfam: DNA_pol_B_palm DNA_pol_lambd_f HHH_8 DNA_pol_B_thumb HHH_5 HHH_2 Cdd1 NTP_transf_2
Other DBs
NCBI-GeneID: 397973
NCBI-ProteinID: NP_001081643
Xenbase: XB-GENE-999702
UniProt: O57383 A0A974D936
LinkDB
Position
3S:22242488..22261477
AA seq 334 aa
MSKRKAPQESPNEGITDFLVELANYERNVNRAIHKYNAYRKAASVIAKYPTKIKSGTEAK
KLDGVGAKIAEKIDEFLATGKLRKLEKIRQDDTSSSINFLTRVTGIGPAAARKFFDEGIK
TLDDLRNNEHKLNHHQKIGLKHFDDFEKRIPRKEMLQMQEIILDKVNNLDPEYIATVCGS
FRRGAESSGDMDILLTHPDFTSESAKQPRLLHQVVQCLEDCNFITDTLVKGDTKFMGVCQ
LPCESDQDYPYRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRTHALEKGFTLNEYTLRPL
GVTGIAGEPLPIDSEKDIFDYIQWKYREPKDRSE
NT seq 1005 nt   +upstreamnt  +downstreamnt
atgagcaaaaggaaagcaccacaggagagccccaatgaaggaatcacagacttcctcgta
gagttggctaattacgagaggaatgtcaacagagctattcacaaatacaatgcttacagg
aaagctgcatcagttattgctaaatatcccactaagatcaagagcgggacagaggccaaa
aaactggatggggttggagccaaaattgctgagaaaatagatgagtttctggccactgga
aaactgcgcaagctagaaaagatccggcaagatgacaccagttcctccattaattttcta
acaagggtcactggaataggacctgcagctgctaggaagttttttgacgaaggaattaag
acattggacgatctcagaaataatgaacataaattgaatcaccatcaaaagattggattg
aaacactttgatgattttgagaagcggatcccacgtaaggagatgttgcaaatgcaggaa
ataattctagataaagtgaataacctggaccccgagtacatcgctacagtatgtggaagc
ttcagacgaggtgcagagtccagtggggatatggatattctactaactcacccagacttc
acttcagagtctgccaaacagccgcgcctcttgcatcaggttgtgcagtgcctggaagat
tgcaacttcatcacagacacacttgtaaagggagacacaaaatttatgggggtgtgccag
ctgccttgtgagagtgaccaggactatccgtaccggaggatagatatcaggctgatacca
aaggaccagtattactgtggagtcctctatttcaccggcagtgatattttcaacaagaac
atgcgaacccatgccctggagaaaggcttcactctgaatgagtacaccctgcgcccgctg
ggagtcacaggaatagccggtgagcctttgccgatagacagtgagaaggatatatttgac
tatatacagtggaaataccgggagccaaaggatcgcagcgaatga

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