Xenopus laevis (African clawed frog): 397976
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Entry
397976 CDS
T01010
Symbol
irx1.L, iro, iro1, iro1-A, irx1, irx1-a, irx1-b, Xiro, Xiro-1, Xiro1
Name
(RefSeq) iroquois-class homeodomain protein irx-1-A
KO
K24889
iroquois-class homeodomain protein IRX
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
397976 (irx1.L)
Transcription factors [BR:
xla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
397976 (irx1.L)
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Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Dicty_REP
Motif
Other DBs
NCBI-GeneID:
397976
NCBI-ProteinID:
NP_001081649
Xenbase:
XB-GENE-865648
UniProt:
Q9YGK8
A0A974CPS7
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Position
6L:71976575..71981574
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AA seq
467 aa
AA seq
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MSFPQLGYPQYLTAGQAAVYGGERPGVLAAAAAAAAAAAAAGSGRPTGAELGSSSTAAVT
SVLGMYASPYSAPNYSAFLPYTTDLTLFSQMGSQYELKDNPGVHPATFAAHTTPGYYPYG
QFQYGDPGRPKNATRESTGTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANA
RRRLKKENKVTWGARSKEDDNIFGSDNEGDHEKNEDDEEIDLESIDIDKIDDNDGEQSNE
EEDEKLEHLRQGEKESLKKESEVMIPSSDGLKPKDSMSLGKESSDTSNTRIVSPGGQGNI
QVPPHSKPKIWSLAETATSPDGALKSSPPPSQGNHTSPPIQHPAFLPSHGLYTCQIGKFH
NWTNGAFLTQSSLINMRSLLGVNPHHAAHHNHHHLQAHQQAPFLATNLSSLSSDKTPERT
SPKHSDRENVPRTDSPPQLKPSFQAVRENTLSQQEGTSRILTALPSA
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcccgcagctgggctacccccagtacctgaccgccggccaggctgcagtctat
ggaggcgaacggccgggcgttttggccgcggcagcagcagcagcggccgcagcagcagca
gccggatccggaaggccgacaggagctgagttgggcagcagttctaccgcggcagtcact
tcagtgctgggcatgtatgccagcccgtacagcgcccccaactacagcgcctttctaccc
tacaccaccgatctcacccttttctcccaaatgggatcgcagtatgaactgaaagacaat
cctggtgtccatccagctacgtttgctgcgcacactactccaggctattacccctatggg
caattccagtatggagacccagggcgacccaagaatgccaccagggagagcaccggcact
ctaaaggcttggctcaacgagcacaggaagaacccatatccaaccaagggggagaagatc
atgctggccataatcaccaagatgaccctcacccaggtctccacgtggtttgccaatgcc
agaaggaggcttaagaaggagaataaggtcacttggggggcaagaagtaaggaagatgac
aacatctttggcagtgataatgaaggagaccatgaaaaaaatgaagatgatgaggaaatt
gacttggagagcatagacattgataaaattgatgacaacgacggtgagcaaagcaacgag
gaagaggatgagaaactggagcacttgagacagggcgagaaagaaagtttgaaaaaggag
agtgaggtgatgattccaagttcagacggccttaaaccaaaagactcaatgtcgctgggt
aaggaaagttctgatactagcaataccagaatcgtaagtcctggtggacagggcaacata
caagtgccacctcacagtaaaccaaaaatctggtccttggcagaaacagcaacaagccca
gatggggccttgaagtcttctcctccaccttctcaaggcaatcacacatctcccccaatc
cagcacccagcctttctacccagccatggactatacacgtgccaaattggcaaatttcac
aactggacaaacggggccttcctcacacagagctctctgataaacatgaggtccttgttg
ggtgtaaacccgcaccatgcggctcaccataaccaccaccaccttcaggctcatcaacaa
gctccatttttagcaacaaacctgagttccctcagcagcgacaaaactccagaacggacc
agtcccaagcactcagacagagaaaatgtacccagaaccgactcaccacctcagttaaaa
ccttccttccaagctgttcgtgaaaacaccctttctcagcaagaaggcacctctcgtata
ttgacagcacttccctctgcctga
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