Xenopus laevis (African clawed frog): 397994
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Entry
397994 CDS
T01010
Symbol
nefm.L, nef-m, nef3, nefm, nefm-a, nefm-b, nf-m
Name
(RefSeq) neurofilament medium L homeolog
KO
K04573
neurofilament medium polypeptide (neurofilament 3)
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xla04812
]
397994 (nefm.L)
Cytoskeleton proteins [BR:
xla04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
397994 (nefm.L)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
DUF1664
Motif
Other DBs
NCBI-GeneID:
397994
NCBI-ProteinID:
NP_001081679
Xenbase:
XB-GENE-6252137
UniProt:
O13098
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Position
3L:135730770..135738083
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AA seq
897 aa
AA seq
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MSYSLETIGNPSYRRMAETRSSYSRTSSSPSSGFRSQSWSRSSPTTISSYKRTNLAAPRV
YSSTDSLDLSQSSAFNGGLKQVRFSEKEQLQGLNDRFAGYIEKVHFLEQQNKEIEAEIQA
LRQKHSGYSQLGEVYEQEMRELRANLELLGHDKAQIVLDSEHLEEDLQRLKERLDEEARI
RDETEAAIRAMKKDMDDTSLVKVELDKKVQSLQEEVNFIKNNHEEEVGELLAQIQASSIT
VERKDFQKTDLASALREIRSQLEGHSSQNMIQTEEVFRNRYAKLTEAAEQNKDAIRSAKD
EIAEYRRQLHSKTVELESVRGTKESLERQLNDIEERHGHDLTSYQETIQQLDNELRGTKW
EMSRHLREYQDLLNVKMALDIEIAAYRKLLEGEETRFCSFSGVPTGPSAIHRPAPIIVSS
TRVQHARSEPPRMKVQHKFVEEIIEETKVEDDRSDMEAALAAMADEFASGLLDGGEEEEQ
EEETQEGGEAEEEIVAAVESSVQAAAPGEEGEEEEEEKGEDEAEAVEEGEKEEEEEEKGE
EGEEEGGEQGEEEDVKADEKEEGEEEAEGEEAKTEEGEEEGETVEEEAEKEEGGEEEEKE
EVAAEEEGGEGEEEGGEGETEEDKGEVEKEEEAETEEAEGGDEEATEEAQDEEVVEETMT
ETKIVREKAEVQEKAAEGEEKQDSEEQKDEGEDEETGEGKEEAEEKEEGGEEKEDASEGT
EQQEEEKAEEEKGESEEGAEEDAGEDEQAKSPEEKSSEETISVSKAASVGPEKEGAKQEE
EKSTQRDNGKEDTAVNGDVEEEEVKEESEDKAVVTNGLDDSPSEDKESSKGQQTVVITKK
IETTTSEGEDGTKYITKSVTVTQKVEEHEETVQEKTVSTKKVEKVTSHAVKEVTEDK
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgagttactccttagaaactatagggaacccctcttataggaggatggctgagaccagg
agtagctacagtcggaccagcagctccccatccagcggattcaggtcccagagctggtca
aggagcagtcccaccaccatctcctcttacaagaggaccaacctcgctgccccaagagtc
tacagctccactgacagtttggatctcagccagtcttctgccttcaatgggggcctcaaa
caggttcgtttcagcgagaaagagcagctccaagggctcaatgatcgctttgccggctac
atcgagaaggtccattttctggagcagcagaacaaggagatagaagctgagatccaggcc
ctcaggcagaagcacagtggatattcccagctgggcgaggtctacgagcaggagatgagg
gaactacgcgcaaacctagaacttctcggccacgacaaggcgcagatcgtgctggactcg
gaacatctagaggaggatctgcagaggctgaaggagaggctggatgaagaggctcgtatc
agggatgaaacagaggccgcaatcagggcaatgaagaaggacatggacgatacgtccttg
gtgaaggtggagctggacaagaaggtgcagtccttgcaagaagaggtgaatttcatcaag
aacaaccatgaagaggaggtgggtgagctcctggcgcagatccaagcctcaagcatcaca
gtggagaggaaagacttccagaagaccgacctcgcctctgccctgagggagatccgctcc
cagcttgaaggccactccagccaaaacatgatccagaccgaagaagtcttcaggaacagg
tacgccaagctgactgaagccgcagagcagaacaaagacgccatccgatctgccaaagac
gagatcgcagagtacaggaggcaactgcacagcaagacggtggagctggagtcggtcagg
ggcaccaaggagtctctggagaggcaactgaacgacatcgaggagagacacggacacgat
ctgaccagctatcaggaaaccatccagcagctggacaatgagttgagaggaacaaagtgg
gagatgtcccgtcacctgagggagtaccaggacctgctcaatgtcaagatggctctggat
atagaaattgctgcatacaggaaacttttggagggtgaagaaacccggttttgctcattc
tctggtgtccctactggaccctctgctatccacaggccagccccaataatagtatcctcc
actcgagtgcaacatgcacggtcagaaccaccaaggatgaaagtgcaacataaatttgta
gaagagattattgaagagacaaaggttgaggatgacaggtcagatatggaagcagcacta
gctgccatggcagatgaatttgcctcaggccttttagatggaggggaagaagaggaacag
gaagaggagacacaagagggaggagaagctgaggaggaaattgttgcagctgtagaaagt
agtgttcaagctgctgctccaggagaagagggagaggaggaagaagaagagaagggagaa
gatgaagcagaggcagtggaagagggagaaaaggaagaagaagaggaagagaagggagaa
gagggggaagaagagggaggagagcaaggagaggaagaagatgtaaaagcagatgagaaa
gaggaaggagaggaagaagctgagggagaggaagctaagacagaagaaggtgaggaagag
ggcgagacagtagaagaagaggcagaaaaggaagagggaggggaggaggaagaaaaggaa
gaagtagcagcagaagaggaaggtggtgaaggagaagaggaaggtggtgaaggagaaact
gaggaagacaaaggggaggtagaaaaggaagaagaagcagagacagaggaagcagagggg
ggagatgaggaagccactgaggaggcacaggatgaagaagtagtggaagagactatgaca
gagactaagattgtcagggagaaagcagaagtacaggagaaagcagctgagggggaggag
aagcaagattcagaggagcaaaaggatgaaggagaggatgaggagacaggtgaaggtaag
gaagaagcagaggaaaaagaggaagggggtgaggaaaaagaagatgcaagtgagggcact
gagcaacaggaggaagaaaaggcagaggaagagaagggagaaagtgaggagggtgctgaa
gaagatgctggagaggacgaacaagcaaaatccccagaggagaagagttctgaagagaca
atctctgtatccaaagctgcatctgtaggaccagaaaaggaaggtgccaaacaggaagaa
gaaaaaagcacccagagggataatggaaaggaagatactgcagtgaatggagatgtggaa
gaggaggaggtaaaggaagagagtgaagacaaagctgtggtcaccaatggccttgatgac
agcccatctgaagataaggagagcagcaagggccagcagactgtagtcatcacaaaaaaa
attgaaaccacaacaagtgaaggtgaggatggtacaaagtacatcactaagtcagtaaca
gtcacacaaaaagtggaagagcatgaggagactgtccaagagaagacggtatccaccaag
aaagtggagaaggtcacttcacatgcagtcaaggaagttactgaggataaataa
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