Xenopus laevis (African clawed frog): 397995
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Entry
397995 CDS
T01010
Symbol
nefm.S, nef-m, nef3, nefm, nefm-a, nefm-b, nf-m
Name
(RefSeq) neurofilament medium S homeolog
KO
K04573
neurofilament medium polypeptide (neurofilament 3)
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xla04812
]
397995 (nefm.S)
Cytoskeleton proteins [BR:
xla04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
397995 (nefm.S)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
DUF1664
Motif
Other DBs
NCBI-GeneID:
397995
NCBI-ProteinID:
NP_001081681
Xenbase:
XB-GENE-6252136
UniProt:
Q6DCC0
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Position
3S:complement(25242002..25248409)
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AA seq
913 aa
AA seq
DB search
MSYSLETIGNPSYRRMAETRTSYSRTSSTPSSGFRSQSWSRSSPTTISSYKRTNLAAPRV
YSSNDSLDFSQSSAFNGDLKQVRFSEKEQLQGLNDRFVGYIEKVHFLEQQNKEIEAEIQA
LRQKQSGYSQLGEVYEQEMRELRVNLELLGHDKAQIVLDTEHLEDDLQRLKERLEEEARI
RDETEAAIRAMKKDMEDTSLVKVELDKKVQSLQEEVAFIKNNHEEEVGELLAQIQASSIT
VERKDFQKTDLASALREIRSQLEGHSSQNMLQTEEVFRNRYAKLTEAAEQNKEAIRSAKD
DIAEYRRQLHSKTVELESVRGTKESLERQLNDIEERHGHDLTSYQETIQQLDNELRGTKW
EMSRHLREYQDLLNVKMALDIEIAAYRKLLEGEETRFSSFSGVPTGPSAIHRPTPISSTR
VQQARAEPPRVKVQHKFVEEIIEETKVEDDRSDMEAALAAMADEFALGFEEGGEEEEQGE
ETQEGEEEAEEEIVAAVESSVQAAAPGEEAEGEEEEEEKGEEEAEAEEEGEKEEEEKEEE
GEDEGEKVDEEEEGGEQGEEEDVKAEEEEEKEEGEEDAEVEETKAEEGEEEGEKGEDEAE
KEEGGEEEEKEEVAADEEGGEGEEEGGEGEKDEDKGEEEKEGEAEAEEAEGGEEETTEEA
QAEEVVEETMTETKIVREKAEVQETEAEEEETQDAEEQKDEGEDEETGEGKETEEKEEGG
EEKEDADEGTEQQEEEKAEEEKGEIDEGETKEGAEEDAGEDKQAKSPEEKSAEETISVSK
AASVGSEKESAKQEEEKSTQRDDGKEDTAVNGDVEEGEVKEESEDKAVVTNGLDDSPSED
KESSKGQQTVVITKKIETTTSEGEDGTKYITKSVTVTQKVEEHEETVQEKLVSTKKVEKV
TSHAVVKEVTEDK
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgagttactcattggaaaccataggaaacccctcttataggaggatggcagaaaccagg
actagctacagtcggaccagcagcaccccatccagcgggttcaggtcccagagctggtca
aggagcagtcccaccaccatctcctcttataagaggaccaacctcgctgccccaagagtc
tacagttctaatgatagcttggatttcagccagtcttctgccttcaatggggacctcaag
caggttcgtttcagcgagaaggagcagcttcaagggctcaatgatcgctttgttggctac
atcgagaaggtccatttccttgagcagcagaacaaggagatagaagctgagatccaggcc
ctcaggcagaagcagagtggatattcccagctgggcgaggtctacgagcaggagatgaga
gaactacgcgtaaacctagaacttcttggccacgataaggcgcagatcgtgctggacacg
gaacacctggaggacgacctgcagaggctgaaggagaggttggaagaggaggctcgtatc
agggatgaaacggaggccgcaatcagggctatgaaaaaggacatggaggacacgtccttg
gtgaaggtggagctggacaagaaggtgcagtccttgcaagaagaggtggctttcatcaag
aacaaccacgaagaggaggtcggtgagctcctagcgcaaatccaagcctcatccatcaca
gtggagaggaaagacttccagaagaccgacctggcctctgccctgagggagatccgctcc
cagctggaaggccactctagccaaaacatgctccagaccgaagaagtcttcaggaatagg
tacgccaagctgaccgaggctgcagaacagaacaaagaagcaatcagatcggccaaagac
gacatcgcagagtacaggaggcaactgcacagcaagacggtggagctggagtcggtcagg
ggcaccaaggagtctctggagaggcaactcaacgacatcgaggagagacacggccacgat
ctgaccagctatcaggaaaccatccagcagctggacaatgagttgagaggaacaaagtgg
gagatgtcgcgtcacctgagggagtaccaggacctgctcaatgtcaagatggctctggat
atagaaattgctgcatacaggaaacttctagagggtgaagagacccggtttagctcattc
tctggtgtccctactggaccctctgctattcacaggccaaccccaatatcctccactcgg
gtgcaacaggcacgagcagaaccaccaagggtgaaagtgcaacataaatttgtagaagag
attattgaagagacaaaggttgaggatgacaggtcagatatggaagcagcactagctgcc
atggcagatgaatttgccttaggctttgaagagggaggggaagaagaggaacagggagag
gagacacaagagggagaagaagaagctgaggaggaaattgtggcagctgtagaaagtagt
gttcaagctgctgctccaggagaagaggcagagggagaggaggaagaagaagagaagggg
gaggaggaagcagaggcagaggaggagggagaaaaggaagaggaagagaaggaagaagag
ggggaagatgagggagagaaagtagatgaagaagaagagggaggagagcaaggagaggaa
gaagatgtaaaagcagaggaagaggaagagaaagaggaaggagaggaagacgcagaggta
gaagaaactaaggcagaagagggtgaggaagagggtgagaaaggagaagatgaggcagaa
aaagaagagggaggagaggaggaagaaaaggaagaagtagcagcagatgaggaaggtggt
gaaggagaagaggaaggcggtgaaggagaaaaagatgaagacaaaggggaggaagaaaaa
gagggagaggcagaggcagaggaagcagaggggggagaagaggaaaccactgaggaggca
caggctgaggaagtagtggaagagaccatgacagagactaagattgttagggagaaagca
gaagtgcaggagacagaagctgaggaggaagagacacaagatgcagaggagcaaaaagat
gaaggagaggatgaggagacaggtgagggtaaagaaacagaggaaaaagaggaagggggt
gaggaaaaagaagatgcagatgagggcactgagcaacaggaggaagagaaggcagaggaa
gagaagggagaaattgatgagggagaaactaaggagggagctgaagaagatgctggagag
gacaaacaagcaaaatccccagaggagaagagtgctgaagagacaatctctgtatccaaa
gctgcatctgtaggatcagaaaaggaaagtgccaaacaagaggaagaaaaaagcacccag
agggatgatggaaaggaagatacagcagtgaatggagatgtggaagagggggaggtaaag
gaagagagtgaagacaaagctgtggtcaccaatggcctggatgacagtccatccgaggat
aaggagagcagcaagggccagcagactgtagtcataacaaaaaaaattgaaaccacaaca
agtgaaggtgaggatggtacaaagtacatcaccaagtcagtcacagtcacgcaaaaagtg
gaagagcatgaggagaccgtccaagagaagctggtatccaccaagaaggtggagaaggtc
acatcacatgcagtagtcaaggaagttactgaggacaagtga
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