Xenopus laevis (African clawed frog): 398002
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Entry
398002 CDS
T01010
Symbol
prph2.S, aofmd, avmd, cacd2, prph-2, prph2, prph2b, rds, rds38, tspan22
Name
(RefSeq) peripherin-2
KO
K17343
peripherin-2
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xla03037
]
398002 (prph2.S)
Cilium and associated proteins [BR:
xla03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
398002 (prph2.S)
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Gene cluster
GFIT
Motif
Pfam:
Tetraspanin
DUF7357
Motif
Other DBs
NCBI-GeneID:
398002
NCBI-ProteinID:
NP_001081695
Xenbase:
XB-GENE-17339014
UniProt:
O42583
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All DBs
Position
5S:complement(17923666..17931255)
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AA seq
346 aa
AA seq
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MALMKTKFNLKRRVKLAQGLWLMNWCCVLAGIALFSMGVFLKIELRKRSEVMDNDESHFV
PNSLILMGSLACALNAFPGKICYDSLDPTKFPRWKPMLKPYLIICLIFNIFIFFTGVVCF
LTRGSLESTLAHGLKNGMRYYKDTDIPGRCFLKKTIDLLQIEFKCCGNNGFRDWFELQWV
SNRYLGGRSKEVKDRIQSNVDGKYLIDGVPFSCCNPSSPRPCIQLQVTNNSAHYSYDHQT
EELNLWSKGCKEALLNYYTSMMSSMGGMVFLVWIMEMAVMIGLRFLHTCLETIANPEDPE
CESEGWILEKSLKDTIKSSWELVKSMGKLNKVETAGGEEAGVATVS
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggccctgatgaaaactaaatttaacctgaagaggagagtgaaacttgcccaagggcta
tggctcatgaactggtgttgcgtcttagcaggcattgcccttttcagcatgggggtattc
ctgaaaattgagctcaggaagcgcagtgaagtgatggataatgatgagagccattttgta
cccaattccttgatcctgatgggctccctggcctgtgcccttaatgcatttccaggtaaa
atctgctacgattccctggatcctaccaagtttcccaggtggaagcccatgctgaaacct
tatctgataatctgtctcatcttcaacatcttcatattcttcactggggtggtctgcttc
ttgaccaggggctccttggagagcactttggcacacggcttaaagaatggcatgcgctac
tacaaggataccgacatccctggcaggtgctttttgaagaagaccattgacttgctgcag
attgagttcaaatgctgcggaaacaatggcttcagggactggtttgagctccagtgggtc
agcaaccgctatctgggggggcgctccaaggaagtgaaagatcgtattcagagcaatgta
gacggcaagtatttgattgacggggttcccttttcctgctgcaacccgagctctcccagg
ccctgcattcagctgcaagtgacaaataactcagctcattacagttacgatcaccagaca
gaggagctgaacctgtggagcaaaggttgcaaggaagctctactaaactactacaccagt
atgatgagctccatgggcggtatggtgtttctggtctggatcatggagatggctgtgatg
atcgggctgaggtttttgcacacgtgtttggagaccattgcaaaccctgaagatcccgag
tgtgagagtgaaggttggatactggagaaaagcctgaaggacaccatcaaatcctcctgg
gaactggtgaaaagcatgggtaagctgaacaaggtggagaccgctggtggtgaggaagca
ggagtagcaactgtcagctga
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