Xenopus laevis (African clawed frog): 398019
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Entry
398019 CDS
T01010
Symbol
ddx4.L, ddx4, vasa, vlg1
Name
(RefSeq) probable ATP-dependent RNA helicase DDX4
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xla03036
]
398019 (ddx4.L)
Enzymes [BR:
xla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
398019 (ddx4.L)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Gene silencing
piRNA pathway
398019 (ddx4.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Zn_ribbon_RlmA
Motif
Other DBs
NCBI-GeneID:
398019
NCBI-ProteinID:
NP_001081728
Xenbase:
XB-GENE-1016814
UniProt:
Q91372
B7ZQ46
A0A974E486
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All DBs
Position
1L:complement(208433023..208488826)
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AA seq
700 aa
AA seq
DB search
MEENWDTEIETEKPTYVPNFSTLETENTDNYSAYSNNDINNQNYDSERSFGNRGGYRSER
SRPSNFNRGSRTERGRGRGFGTNRNDNYSSERDVFGDDERDQRRGFPGRGGYNGNEDGQK
PNAFRGRGGFRNENEQRRGFGERGGFRSENGQRNFDNRGDFGNSGEEEDRPRSYGRGGFN
NSDTGGRGRRGGRGGGSQYGGYKGRNEEVGVESGKSQEEGNEKDEKPKKVTYIPPPPPDG
EDNIFRQYQSGINFDKYDEILVDVTGKDVPPAILTFEEANLCETLRRNVARAGYVKLTPV
QKHSIPIIMAGRDLMACAQTGSGKTAAFLLPILSYMMNEGITASQYLQLQEPEAIIIAPT
RELINQIYLDARKFSYGTCVRPVVVYGGIQPVHAMRDVEKGCNILCATPGRLLDIVSKEK
IGLSKLRYLVLDEADRMLDMGFAPEIEKLMTKPGMPTKEKRQTLMFSATYPEEIRRLASN
YLKSEHLFVVVGLVGGACSDVAQTVLEMRENGKMEKLLEILKSSEKERTMIFVNTKKKAD
FIAGYLCQEKFSSTSIHGDREQYQRESALWDFRTGKCTVIVCTAVAARGLDIENVQHVIN
YDVPKEVDEYVHRIGRTGRCGNTGKATSFFNVQDDHVIARPLVKILTDAHQEVPAWLEEI
AFGGHGALNSFYAADSMGEQAGGNAVTTPSFAQEEEASWD
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaaactgggatactgaaattgaaactgaaaaaccaacttatgtaccgaatttc
agtaccttggagaccgaaaatacagataattacagtgcctactctaacaatgatatcaac
aatcaaaattatgattctgaaagaagttttggaaaccgaggaggttatcggtctgaaagg
agtaggcctagtaattttaacagaggtagtcgaactgaaaggggaagaggacgagggttt
ggtactaatcgaaatgataattattcttctgagagagatgtgtttggagatgatgagagg
gatcaacgcagagggtttccaggcagaggtggatataatggcaatgaagatggacagaaa
cctaatgcctttcgaggaagaggtgggttcagaaatgagaatgaacagcgtcgaggcttt
ggagaaagaggaggatttagaagcgagaatggacagcgaaactttgataacagaggagat
tttggtaattctggtgaagaagaggatcgtccacgttcttatgggagaggtggttttaac
aactctgatactggtggaagaggacgaagaggtggccgaggtggtggaagccagtatggt
ggatacaaaggaagaaatgaagaagttggtgtagaatctggaaaaagtcaagaagaagga
aatgaaaaagatgaaaaaccaaaaaaggtgacctatattcctccgcctccacctgatggt
gaagataatatattccggcaataccagtctggaatcaattttgataaatatgatgagatt
cttgttgatgtgacaggaaaggatgttcctcctgccatactgacttttgaagaagctaac
ctttgtgaaacactaagaagaaatgttgctagagctggatatgtaaagctaacaccagtg
cagaaacacagcatccctattataatggctggtcgtgatttaatggcttgcgcacagact
ggttctggtaaaactgctgcttttcttttgccaattctcagttatatgatgaatgaagga
attacagctagtcagtatttacaacttcaggaaccagaagccataattattgcccctacc
agagaacttattaaccagatatatctcgatgctcgaaaattttcatatggaacctgcgtg
cgtccagtagttgtatatggtggtatacaacctgtacatgcaatgagggacgttgaaaaa
gggtgcaatatactttgtgcaacccctggaagattgctggacatagtaagcaaagaaaaa
attggcttaagtaagctaagatatctagttctggatgaagcggatcgcatgttggatatg
ggatttgccccggaaatagaaaaattaatgacaaagccaggaatgccaacaaaagaaaag
cgacaaacactaatgttcagtgctacctatcctgaggaaattcggaggttggcttcgaat
tatttgaaatctgaacatttgtttgttgtggtcggattagttggaggagcttgtagtgat
gtggcacaaacagttcttgaaatgcgagaaaatggaaagatggaaaagctacttgaaatt
ctgaaaagctcagagaaagagcgaactatgatttttgtgaatacaaaaaagaaggcagat
tttattgctggttacctttgtcaagagaaattttcatcaacaagcattcacggtgataga
gaacaataccaaagagagagtgctctctgggatttcagaactggaaagtgtactgttatt
gtctgcacagcagttgctgccagaggcttggatattgaaaatgttcaacacgtgataaat
tatgacgttcctaaggaagttgatgagtacgtccatagaattggtcgtaccggtcgctgt
ggtaacaccggaaaggcaacatcatttttcaatgttcaggatgaccatgtgattgctcgt
ccccttgtgaaaattcttaccgatgctcatcaagaagtccctgcttggttagaagaaatt
gcctttgggggccatggagctttgaatagcttttatgcagcggactctatgggcgaacag
gccggaggaaatgccgtcactactccttcattcgcacaagaagaagaggctagctgggat
taa
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