KEGG T01010: 398169

Xenopus laevis (African clawed frog): 398169

Entry

398169            CDS       T01010

Symbol

bicc1.S, bic-c, bicc, bicc1, bicc1-a, bicc1-b, x-Bic-C, xBic-C

Name

(RefSeq) protein bicaudal C homolog 1-A

K18756

protein bicaudal C

Organism

xla Xenopus laevis (African clawed frog)

Brite

KEGG Orthology (KO) [BR:xla00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xla03019]
    398169 (bicc1.S)
Messenger RNA biogenesis [BR:xla03019]
Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     398169 (bicc1.S)

SSDB

Motif

Pfam:

KH_BICC1 KH_BICC1_1st KH_1 SAM_1 KH_Vigilin SAM_2 KH-I_KHDC4-BBP KH_Mug60-KHD4 SAM_Ribosomal_mS41

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

Xenbase:

UniProt:

LinkDB

Position

7S:7647047..7799243

AA seq 963 aa
MAAQCESIGGDMNQSDPGSNSERSADSPVPGSEDDSPHDPEWREERFRVDRKKLETMLQA
AAEGKGKSGEDFFQKIMEETNTQIAWPSKLKIGAKSKKDPHIKVSGKKENVKEAKERIMS
VLDTKSNRVTLKMDVLHTEHSHVIGKGGNNIKKVMEETGCHIHFPDSNRNNQAEKSNQVS
IAGQPAGVESARVRIRELLPLVLMFELPIAGILQPIPDPNSPTIQQISQTYNLTVSFKQR
SRVYGATVIVRGSQNNTSAVKEGTAMLLEHLAGSLATAIPVSTQLDIAAQHHLFMMGRNG
CNIKHIMQRTGAQIHFPDPNNPLKKSTVYLQGTIDSVCLARQYLMGCLPLVLMFDMKEEI
EIEPQCITQLMEQLDVFISIKPKPKQPSKSVIVKSVERNALNMYEARKCLLGLDSSGVTV
TNQSTLSCPVPMNCHGLDILAAGLGLSGLGLLGPNTLSVNSTTAQNSLLNALNSSLSPLH
SPSSAAPSPTLWAASLANNATGFSAIPHLMIPSAAQATLTNFLLSGVPNYGQNTPSPPPG
LTPVDVHMNGIHSECKKVTSALNGHVKPTNMKYGTISSSSLGDKVLNTNLAEASRQSNNH
SSAEEVNSKTDPEGCNDAFVEVGMPRSPSHSANTKDLKQMLNSTKAPCPTRQTVKLLHGT
KNSHLHGERLLSDSEMSPMEGPVTDKKAPGSERAAERAAAQQNSERARLTSQSEYGTMQA
YDYEQKKLLATKAMLKKPVVTEVRTPTNTWSGLGFSKSTPAETIKELRRANHVPYKPTMT
TTYENSSLSRSNSREQLGNGSDSENWRERNGIDSSQNDYSSSIGSPKRKQNKSAEHYLSS
SNYMDCISSLTGSNGCNLNSSFKGSDLPELFSKLGLGKYTDIFQQQEIDLQTFLTLTDQD
LKELGISTFGARRKMLLAISELNKNRRKLFEPTNIRASFLEGGASGRLPRQYHTDIASVS
GRW

NT seq 2892 nt +upstreamnt +downstreamnt
atggcggctcagtgcgagtctatcggcggagacatgaaccagtcggacccgggatccaat
agcgagcggagcgctgactccccagtcccgggctcagaggatgattccccccacgatcct
gagtggagagaggaaaggttccgcgtggatcggaagaagctcgagacaatgttacaagct
gctgctgaaggaaaaggaaaaagtggagaagatttctttcagaagattatggaagagaca
aacacgcagatcgcttggccgtccaagctgaagattggggcaaagtcaaagaaagatccg
cacattaaagtctccggcaagaaagaaaatgtgaaggaagcgaaggagaggatcatgtca
gtgctggacactaagagtaaccgggtgacattgaagatggatgtgttgcacaccgagcat
tcgcacgtcattgggaaaggtggcaacaacatcaagaaagtgatggaagaaaccggctgc
cacatccatttccctgattccaataggaataaccaagccgagaaaagcaaccaggtgtcg
attgcagggcaaccagctggtgtggaatctgcaagagtacgaataagggagctgcttcct
ttggtgctgatgtttgagctgcctatagccgggattctgcaaccgataccagacccgaac
tctcccacaattcagcaaatatcccaaacgtacaatttaacggtttctttcaagcaacgc
tcacgtgtttacggcgctactgttatagtgaggggttcccagaataacaccagtgctgtg
aaggagggtacagctatgctgcttgaacatcttgctggcagcctggctactgccatccct
gtcagcactcaactggatattgctgctcaacatcacctcttcatgatgggacgcaacggt
tgcaatattaagcacatcatgcaaagaacgggtgctcagattcacttcccagatcctaac
aaccccctaaagaaatctactgtctacctccaaggcaccattgattctgtttgtcttgct
aggcagtatctcatgggttgcctccctcttgtgttgatgtttgacatgaaggaagagatt
gagatagagcctcagtgcatcactcagctcatggaacagttagatgttttcatcagcatt
aaacccaaacctaagcagccaagtaaatccgttatagtaaaaagcgtggagcgaaatgcc
ttaaatatgtacgaagcaagaaaatgccttctcggactcgatagcagcggcgtgaccgtt
acaaaccagtctacgttatcctgtccggttccgatgaattgccacgggttggatattttg
gcagcgggcctaggtctctctggattaggtctcttgggtcccaacaccctttcagttaat
tccactaccgctcagaactctctgctgaacgcactgaacagctctttgagccctctgcat
agtccaagctctgctgctcctagcccaacgttatgggcagcttcattagcgaataacgca
acaggcttctcagcaatcccccatttaatgatcccatctgctgcacaagcaacattaacc
aacttcttgctttctggggttccaaactatggtcagaacactccatctccacctccgggg
ctgacgcctgttgatgtccacatgaatggcatacactctgaatgcaagaaggttacatcc
gctttgaatggtcatgtaaagccgacaaatatgaaatatggaacaatatcttcttcatct
ctaggagacaaggtgttgaacacaaatcttgcggaggcgtcaaggcagtcaaacaaccac
agctcggctgaagaagtgaattccaaaacagatccagaaggttgtaacgatgcctttgtg
gaagtgggaatgcccagaagtccgtctcattctgccaacaccaaggatctcaagcagatg
ctcaactccaccaaagctccgtgtccaaccagacagaccgtcaaactattacacggcaca
aaaaactctcacttacatggcgaaagattgctctccgattcagaaatgagtcctatggaa
ggtcccgtgactgataaaaaggcccctggaagcgaacgggctgcggaaagagcggctgcc
caacagaattccgagagggcgcggcttacttcacagtcggagtatggcactatgcaggcc
tatgactatgaacagaagaagctgttggcaacaaaggcgatgttaaaaaagcctgtggtg
acagaagtgaggaccccaacaaacacatggagtgggcttggcttctccaaatccacgcca
gcggaaaccattaaggaactgagacgggccaaccatgtgccttacaagcccaccatgact
acgacatacgagaactcctccctgtcgaggtctaacagccgggaacagctgggaaacggc
agcgactctgaaaactggagggaaaggaatgggattgactcgtctcagaacgactactcg
tcctccatagggagtcccaagcgaaagcaaaacaaatctgcagaacactatctcagcagc
agtaattacatggactgcatttcctcactaactggaagcaatggatgcaacctaaacagt
tcattcaaaggttccgatcttcctgaactcttcagcaaactgggcctggggaagtacacc
gacatattccagcagcaagagattgaccttcagacgttcctcacattaacagatcaggat
ttaaaggaacttggaattagtactttcggcgctcgaaggaaaatgctgctggctatctca
gaactgaataaaaaccgaaggaagttatttgagcccaccaatatacgcgcctcgtttctg
gagggcggagccagcggaagactcccgaggcaatatcacacggacattgcaagcgtcagt
gggcgctggtag

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