Xenopus laevis (African clawed frog): 398185
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Entry
398185 CDS
T01010
Symbol
six1.L, six1, XSix1
Name
(RefSeq) homeobox protein six1
KO
K15614
homeobox protein SIX1
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
398185 (six1.L)
Transcription factors [BR:
xla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
398185 (six1.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_3
YdaS_toxin
Phage_mat-A
Motif
Other DBs
NCBI-GeneID:
398185
NCBI-ProteinID:
NP_001082027
Xenbase:
XB-GENE-480721
UniProt:
Q9I8H0
A0A974C885
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All DBs
Position
8L:93774930..93778615
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AA seq
284 aa
AA seq
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MSMLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRT
IWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERENTENNNTSTNKQNQLSPLDGGKSLMSSSEEEFSPPQSPDQNSVLLLQGSLTH
PGATSYSLSALSASQGSHGLQGHQHQLQDSLLGPLTSSLVDLGS
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgctgccttcctttggcttcactcaggagcaagtggcctgtgtgtgcgaggtg
ctgcagcagggaggcaacttggagagactgggcagattcctatggtccttgccagcctgc
gatcacctccacaagaatgagagcgtcctaaaggcaaaggccgtggtggcatttcacagg
ggcaacttcagagaactgtacaagatcctggagagccaccagttctccccgcacaaccac
cccaaactgcagcaactctggctcaaggctcattatgtggaggcagagaaactgaggggg
agaccactgggggcagtgggcaagtacagggtcaggaggaaattcccgctgcccaggacc
atctgggatggagaagagaccagttactgctttaaggagaagtcccgaggggtgctgaga
gaatggtatgcccataacccctacccgtctcccagggagaagcgggagttggctgaggcc
actggactaaccaccacccaggtcagcaattggttcaagaacaggaggcaaagggacaga
gcggcggaggcgaaagagagggaaaatacagaaaacaataacacatctaccaacaaacag
aatcaactgtcacccctagacggagggaagtcgctaatgtccagttcagaagaggaattc
tcgcccccacaaagccctgatcagaactcggtgctcctgttgcagggcagcctcacccac
cccggggccacctcttactccctgagcgcacttagcgcatcgcagggcagtcacggctta
caggggcaccagcaccagctgcaggactctctgctcgggcccctcacctccagcctggtg
gatctgggatcgtaa
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