KEGG   Xenopus laevis (African clawed frog): 398193
Entry
398193            CDS       T01010                                 
Symbol
lefty.S, antivin, atv, leftb, lefty-1, lefty-a, lefty-b, lefty1, leftyb, XATV, Xlefty
Name
(RefSeq) left-right determination factor S homeolog precursor
  KO
K04668  left-right determination factor
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:xla00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04350 TGF-beta signaling pathway
    398193 (lefty.S)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:xla04052]
    398193 (lefty.S)
Cytokines and neuropeptides [BR:xla04052]
 Cytokines
  Transforming growth factors (RSTK binding)
   398193 (lefty.S)
SSDB
Motif
Pfam: TGFb_propeptide TGF_beta DUF5422
Other DBs
NCBI-GeneID: 398193
NCBI-ProteinID: NP_001082043
Xenbase: XB-GENE-6251914
UniProt: Q9DFC5
LinkDB
Position
5S:12243936..12246090
AA seq 367 aa
MGVTTKSLRLCLIFSTLCLAGISAFNPDDIRDALLKKLNLQEVPKLEKRDVENLVIPRHI
QAKYMSMLHNHRERKKRSLPSLAGILRGISGNADISGEILYSDSSKQSLVFGMESRIPEN
SEVTMAELKLFKKPPKIMNVPERRFHRPVNNARVSVYYVEILKDGTNRTSLVDSRLVPIM
ESGWRSFDVTQAVHYWMRSGGQSSMHLEIHVDGERHGSHASEMAKMVRFTTQSPSDNSLG
KPELVLFTLNLNEQGTRGDCSASGAKKDNICCREEYFINFRELTWTQYWIIEPAGYNAFR
CTGSCKQPKYPLSHYHYGQRTCAVVESAPLPVMYLVKKGDYTEIEVAEFPNMIVEKCGCT
MDNIAII
NT seq 1104 nt   +upstreamnt  +downstreamnt
atgggtgtcactaccaaatctttgagactctgcttgatcttcagcaccctgtgcctggct
ggcatcagtgccttcaacccagatgacatcagagatgctctgctaaaaaaactcaacctc
caagaggtccccaaactggagaaaagagacgtggagaacctggtgatccccaggcacatc
caagccaagtacatgtctatgctgcacaatcacagagagaggaagaagagatcactgccc
agcttggctggcatcctcaggggcatctcgggcaatgcagatatttccggggagattctg
tactcagactccagcaagcagtccctggtttttggaatggagtcccgtatcccagagaac
agtgaggttaccatggctgaactcaagctcttcaagaaaccccctaaaatcatgaacgtt
ccagaaaggagattccaccgacctgtcaacaatgccagagttagtgtgtattatgtggag
atattgaaagatggcaccaacagaacctccctggtggactctaggcttgtgccaatcatg
gagtcgggctggaggagctttgacgtgacccaggctgtgcattactggatgagaagtggt
ggacagtcatcaatgcacttagagatccacgtggatggggagcgacatggaagtcatgca
tctgagatggcaaagatggttcgtttcaccacccagagcccatcagacaactctctggga
aaaccagagcttgtcctgtttactctcaacctcaatgagcaggggacccgtggagactgc
tcagcatcaggtgccaagaaagacaacatctgctgcagagaggaatatttcattaacttt
cgggaacttacctggacacagtactggattattgagccagcaggatacaacgcttttcgg
tgcactggaagttgcaagcaaccaaagtaccccttgtctcattatcactatggacagaga
acatgcgccgtggtggaaagcgccccactacccgtaatgtacctggtcaaaaagggagac
tacacggaaatcgaagtggcggagttccctaatatgattgtcgaaaaatgcggttgcaca
atggacaatatcgctatcatatga

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