Xenopus laevis (African clawed frog): 398220
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Entry
398220 CDS
T01010
Symbol
glis2.S, glis2, glis2-a, glis2-b, glis2a, NKL, nphp7
Name
(RefSeq) zinc finger protein GLIS2
KO
K09233
zinc finger protein GLIS2
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
398220 (glis2.S)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xla03037
]
398220 (glis2.S)
Transcription factors [BR:
xla03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
398220 (glis2.S)
Cilium and associated proteins [BR:
xla03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
398220 (glis2.S)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
FOXP-CC
zf-C2H2_6
zf-C2H2_4
Zap1_zf1
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
398220
NCBI-ProteinID:
NP_001082092
Xenbase:
XB-GENE-6251812
UniProt:
Q98T94
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Position
9_10S:101324145..101349817
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AA seq
492 aa
AA seq
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MHSLDEPLDLKLSISKLRAAREKRERIGANARKRSVHHELMIRDDGTTVITPICSSPPPG
FRYRDGDSPPFSSPPIVDLSLSPPSGTDSPSRSSLSPDRAAGDTLIDNPLLRCGGDSASS
PFQFFLPLGSGLQLPLSMFMSPPKENRLSLEFTEQKQLVCQWAKCNRLFELLQELVDHVN
DFHVKPEKDAGYCCHWEGCARRGRGFNARYKMLIHIRTHTNERPHCCPTCHKSFSRLENL
KIHNRSHTGEKPYMCPYEGCNKRYSNSSDRFKHTRTHYVDKPYYCKMPGCQKRYTDPSSL
RKHIKAHGHFISHQQRQLLKIHQPPKLPATGDSNYTNGTQLIIPNPAAIFGSQSLPIPLT
PGPLDLSSLACSSVASALAGLPNPMLTLAGSPLNLAKGSLLSQAYSAAGLGLPLISLVTS
GKVENEKRPKGQRGDSSERTDGSKLRPGSIEGLSLLPRGVLDLSPGVGSESLLPGWVVIP
PGSVLLKPAVVN
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgcactccctggatgaacccctggatctgaagctcagtatttccaagctgcgggcagcg
agggagaaacgagagcggattggtgcaaatgccagaaaacgatctgtgcaccatgagttg
atgatccgggatgatggcactacagttatcacccccatttgctcctcacccccaccaggg
tttcggtatagagatggagacagccccccattttcctctcctcccattgtggacctcagc
ctttccccaccttctgggactgactcccccagccgttcatcattgtccccagacagagct
gcaggggacactctgattgacaacccattgcttcgctgcggaggggattccgcttccagc
cctttccagttctttttgcctcttggctctggacttcagctgcccctttccatgtttatg
tccccccccaaagagaacaggctttccctggagttcacagagcagaaacagctggtgtgt
caatgggcgaagtgcaatcgcctgttcgagctcctgcaggaattggtggatcatgttaat
gatttccacgtcaagccagagaaggatgccggatactgctgccactgggagggctgtgcc
cgtcgggggcgaggtttcaatgccaggtataagatgctgatccacattcggacccacaca
aacgagaggccacattgctgccccacctgccacaaaagcttctcacggctggaaaatctc
aagatccacaatcgatcccacacaggtgaaaaaccctacatgtgtccttacgagggctgc
aacaagcgttactccaactcgagtgaccgcttcaagcatacgcgcacgcattacgtggac
aagccctattactgcaagatgccagggtgccagaaacgctacacggatcccagctccttg
cgcaagcatattaaggctcatggtcacttcatctcccaccagcagcggcagctgcttaaa
atacaccagcctccgaaactgccagctacaggtgacagcaattacaccaatggcacccag
cttatcattcctaacccggcagccatttttggcagccagtcgctacccattcctctgact
cctgggcccctggacctgagctcactggcatgcagcagtgtggcatccgctctggccggt
ctccccaatcctatgctgacacttgcagggtctcctctaaatctggcaaaagggtctctt
ctgtcacaggcttactctgccgcaggcctcggcctacctctgatctccttggtaacatca
gggaaagttgaaaatgagaagcgccctaagggtcagaggggagacagcagtgaaagaact
gacgggtcaaagttgaggcctggctcaattgaaggtctctctctgctgcccagaggtgtg
ttagatctctcccccggagtgggctcagaatctctgctgccaggatgggtggtcattcct
ccaggatccgtattactgaaaccagccgtggtcaattaa
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