Xenopus laevis (African clawed frog): 398236
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Entry
398236 CDS
T01010
Symbol
paxip1.L, cagf28, cagf29, k14, pacip1, paxip1, paxip1l, ptip, tnrc2
Name
(RefSeq) PAX-interacting protein 1
KO
K14972
PAX-interacting protein 1
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xla03036
]
398236 (paxip1.L)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
MLL3/MLL4 complex
398236 (paxip1.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
RTT107_BRCT_5
LIG3_BRCT
Motif
Other DBs
NCBI-GeneID:
398236
NCBI-ProteinID:
NP_001082120
Xenbase:
XB-GENE-865353
UniProt:
Q6DDH5
LinkDB
All DBs
Position
6L:complement(14572986..14614743)
Genome browser
AA seq
1320 aa
AA seq
DB search
MAEDEVKVPEDMFKDVKFYPVGDLDPKVVQMLKAGKAKEVSYNALATHIIAEDGDNPEVG
EAREVFDLPVVKPSWVILSVRCGVRLPENGFSPESGQIFFGVTACLSQVSPDDRNSLWAL
TTFYGGDCQLSLNKKCTHLIVPEPKGNKYEYAFQRGSIKIVTPDWVLDSVSEKTKKDEAL
YHPRLIVYEEEEEEEEEEAENEEQESQNGSDEDKYSSKSSPVTSRDGSPVHNRESSPKRS
SSDKIKSELMFDDSSDSSPEKQERNLNWTPAEVPQMSTAKRQLHQGKDSGLINLCANVPP
VPGNILPPEARNNLLASLPGAPGSERPDMMAFRSPAVRTLRNITNSADVQQVNRPSNVAH
ILQTLSASTKSLEQQVNHPQQGHPNAVLFGQVKPLTSEAQHLIQQSHQPHQQQQQNHPIV
QLQPQQLLQLQQQQQQITQQVFPQHQFPQVNQQHPFTQLQFPQQQLHPQQQLHRPQQQTI
QHFQQQHALQQQLHQLQQQHLQPKPQTLQQNMQQQNLQQPNLQQILQHQQTIQQTPSQQQ
ALQPAIQQQQMLQPNIQQQQTLQSNLQQQTLQPIIQQQQGLQQQNLQQSLQQIQQQMQHL
TPQQKQQIQQQQQQMLQKQQLQSQSLQQQQMQTHVLQQQQIQTQALQQQQQIQNQALQQP
QQNQVQTHALQQHRLQSQTLQQQHHVQGQTVQQQTHQLQTQTLQQQHQIQTLQIPHQIPA
PNQQHQIPPQMLQQQTLQLQQQIKQQQTLQQLQQQQLQQQQTLQQQQIQQTTVQQQMQPQ
IQQPQMQSGVQQQSSLQPQQMQQHKHNLQQVQHQLQQLQQQRMQQRQMALPQQIANQQPP
QPHQLHGHDPSVEIPEDFFLLGCVFAIADYPEQMPDKQLLATWKRIIQTHGGTVDAALSS
RCTHLLCESQVSSMYAQALKERKRCITAHWLNAVLKKKKMVPPYRALHFPVAFPPGGKPC
SQHIISVTGFVDSDRDDLKLMGYLAGAKYTGYLCRSNTVLICKEPSGLKYEKAKEWRIPC
VNALWLCDILLGNLEALRQIQHSRYTVFNLQDPLAPSPHLVTDLLDAWRMPLKVSSEVLM
SIRMPLKPKQNEPAVQPKRPRIEDIPPPTKKLSPDQTPHVMFTGFDPLQVQQYIKKLYIL
GGEVADTAQKCTHLVANKVTRTVKFLTAISVAKHIVTPEWLDESFKSQKFAEEQNYILRD
AEAEVLFCFSLEESLKKAHVTPLFKGKYFYITPGICPSLSTMKAIVECAGGKILMKQPSF
RKIMEHKQNKRLAEIILISCENDLHLCREYFAGSVDVHNAEFVLTGVLTQALDYESYKFT
NT seq
3963 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggacgaggtgaaagttcctgaggacatgttcaaagatgtgaagttttaccca
gtcggtgatctggacccgaaggttgttcagatgctaaaagctggaaaggcaaaggaggtt
tcatataatgcccttgctacacacatcatcgcagaagatggtgacaatcctgaggttgga
gaagctcgtgaggtttttgatcttcctgtcgtgaagccttcttgggtgatactgtctgtt
cgctgtggagttcgccttccggaaaatggattttctccagaatctggtcagatatttttt
ggagtaactgcttgcctttcccaggtatcacctgatgatcgcaattctctttgggcactg
actactttttatggtggggattgtcagctaagtctcaataagaagtgcactcatttgatt
gttcctgaaccaaaagggaacaaatatgaatatgccttccaacgaggaagcataaaaatt
gttacaccggattgggttttggactctgtatctgaaaaaaccaaaaaggatgaggcactt
taccatcctagacttatagtttatgaagaagaagaagaggaggaagaagaagaggcagaa
aatgaagagcaagaatctcaaaatggcagtgacgaagataaatattcatctaagtccagt
ccggttacatctcgtgacggatctcccgtacacaatcgagagtcttctccaaaacgcagc
agctcagataaaataaagagtgaactcatgtttgatgattcatctgactcttctcccgag
aaacaggagagaaatctgaactggaccccggcagaagtcccccagatgtccactgcaaaa
agacagctgcaccaaggcaaggattctggacttattaatttatgtgctaatgttcctcct
gtgccaggaaatatactaccccctgaagcacgaaataatttgctcgcttccctcccagga
gcccctggatcagagagaccagacatgatggctttccgcagtccagcagtgagaacacta
agaaacattactaatagtgctgatgtacagcaagttaataggccgtccaatgttgcacat
attttgcagactttgtcagcttccaccaaatctttagagcaacaagtaaatcatccccag
caaggccatccaaatgcagtattgtttggtcaagtaaaacctttgacgtccgaagcacag
catttaatacaacagtcgcatcagcctcaccagcagcagcagcagaatcatcctattgta
cagcttcagcctcagcagcttttacagttgcagcaacagcagcaacaaattacacagcag
gttttcccacaacatcagtttccccaagtaaatcaacagcatcctttcactcaactacag
tttcctcagcaacagctgcatcctcaacagcagctacatcgcccgcagcaacaaactata
caacatttccagcagcagcatgcgctacagcagcaactgcatcagctgcaacaacagcat
ctgcaaccaaaaccgcaaaccctacagcagaatatgcaacagcagaatcttcagcaacca
aaccttcagcaaattcttcagcatcaacagactattcagcagaccccatcacagcaacag
gctcttcagcctgctattcagcaacagcagatgcttcagcccaacattcagcagcaacaa
acgcttcagtctaaccttcaacaacagacccttcagccaatcattcaacagcaacaagga
cttcagcagcagaatcttcagcagagccttcaacagatccaacagcaaatgcagcatttg
actcctcaacagaagcagcaaatacagcagcagcaacaacagatgcttcagaaacagcaa
cttcagagccagagtctccagcagcagcaaatgcaaacgcatgttctgcagcagcaacaa
attcagacacaggcactgcagcaacagcagcaaatacagaaccaggctcttcagcagcca
cagcagaaccaagtacaaacacatgctcttcaacagcatcgcctacagtcacagacactg
cagcagcagcatcatgtacaggggcagactgttcagcagcagacacatcaattacagaca
caaacgctccaacagcaacatcagattcaaacacttcagattccgcatcaaattcctgca
ccaaaccaacaacatcagatcccaccacagatgcttcagcagcaaacgcttcaacttcag
caacaaataaaacagcagcagacccttcagcagctgcagcaacagcaattacagcagcag
caaacccttcaacagcagcagattcaacagacaacggttcagcaacaaatgcagccacag
attcagcaaccgcagatgcagtcaggagttcagcaacagtcctcactccagccacagcag
atgcaacaacataaacacaatctgcagcaggttcagcatcaactgcaacaacttcaacag
cagcggatgcagcagcgacaaatggcattaccccaacagattgctaatcagcaaccacca
cagccgcatcagctgcacggtcatgatccttctgtggagattcctgaagatttctttttg
ttgggatgtgtgtttgcaattgctgattatccagaacaaatgcccgataaacaactactt
gcaacctggaaacggataatacagacccatggaggtacggtggacgcagcactttcaagc
aggtgcactcatcttctgtgtgaaagccaagtcagtagcatgtatgctcaggcattgaaa
gagaggaagcgatgtatcactgctcattggctgaatgcagtattgaaaaagaagaaaatg
gtgccgccgtaccgagctcttcatttccctgtagcatttccaccaggagggaagccctgc
tctcagcatatcatttcagtgaccgggtttgttgacagtgacagagatgatctgaaacta
atggggtacttagcaggcgccaagtacactggatacctgtgtcgcagcaacactgttctc
atttgtaaagagccgagcggcttgaagtacgagaaagctaaagagtggaggataccgtgt
gtaaatgccctgtggctttgtgatattcttcttggaaaccttgaggcattacgtcagatt
cagcacagccgatatacagtatttaatcttcaggaccctcttgcaccatcacctcatctg
gttacagatctcctagatgcctggagaatgccattgaaagtgtcctcggaagttctgatg
agtattcgaatgcctctaaagccgaagcaaaatgagcctgctgttcaacctaaacgccca
aggattgaagatataccgcctccaactaaaaagctgtcacctgatcagacacctcatgtt
atgttcactggatttgatccactgcaggtccagcaatatatcaagaaactgtatattctt
ggtggagaagtagccgatacggcacagaaatgcactcacttggttgccaacaaagtgacc
cggactgtaaagttcttgactgcaatttcagtggcaaagcacattgttacccccgagtgg
ctagatgagagcttcaaatcccaaaagtttgctgaggaacagaattacatattgcgggat
gctgaagcggaagtgctgttctgcttcagtttagaagaatcgctaaaaaaagcgcacgtg
actccgctcttcaaggggaagtatttttacatcacccctggaatttgcccaagtctctcg
acaatgaaagccattgtagaatgcgctggtgggaaaatactaatgaagcagccgtctttt
cggaaaattatggaacataagcagaataaacgattagctgagatcattttaatatcctgc
gaaaacgatcttcatctgtgcagagaatactttgctggcagcgtggatgtgcacaatgca
gaatttgttttgacgggagttctcacccaggcattggactatgaatcatataagtttact
tga
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