Xenopus laevis (African clawed frog): 398252
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Entry
398252 CDS
T01010
Symbol
tdrd6.L, tdr2, tdrd6, tdrd6-like, xtr
Name
(RefSeq) tudor domain-containing 6-like
KO
K18405
tudor domain-containing protein 1/4/6/7
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xla03036
]
398252 (tdrd6.L)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Gene silencing
piRNA pathway
398252 (tdrd6.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
Agenet
SMN_Tudor
DUF4537
Motif
Other DBs
NCBI-GeneID:
398252
NCBI-ProteinID:
NP_001082149
Xenbase:
XB-GENE-6079334
UniProt:
Q90WE3
LinkDB
All DBs
Position
5L:complement(158695024..158755832)
Genome browser
AA seq
1905 aa
AA seq
DB search
MVEVYFIDHGNTEMVDWYNVKKLPAELREMPGLAIHCCVADICPLGVRWSPEAILAFKIA
VVDKKLIIYVVSKELHKYIIEVLDNSRIEQRSMAKILSAAGHAKYEEVEPVAQHTGNMSD
IDNETQQQFLGYINKDTSSLKTQQKEDVCSMEDDNSVPYSPYEDQFFEPGATIEVVVSCI
ISPGLFWCQNASLSSKLEKLMAKIQDYCSSTDCPYERGAYACLAKSSCDGKWYRAFITNN
RPGSKANANQVEVLYVDYGITETVLVKDLRCIESELFDLKAQAFRCSLYNLIAPDSENPF
EWDTKATLSFHRFVDSSAKKCSEFKCTFFATALVKTELSYIVDVFTPFASICKLLVELGH
AKQLSHTTLAPSVQLQTYYYSMHDIKIGGEEEVYITYVNSSLEFYCQLSRNTETIDMIAS
ATARVCSEVRKFELSVTPGPLCLAKFSDQQWYRCFINTNKNSTDAFFVDYGNTEKVNKEE
MLPIPSDAYELLHFPMQAIKCSLSDMPDTVPSDVVLWFENHVLEKPLRAIIVAKETDGKL
IVELYDGSQQINSILKTKLGWKSSRAEGSFGNSEKRNQLNDLDRGGRKETTSKFQPYSQG
SKFSPDLDGHSQNGLTYQKPEFQTKEREQFEQKPNLRTPRSYNNDREVYQVQKNMSQSGF
APQKTGGFRSKDREAFEQRPNLKASGLYSQGRETPSMSQNSSYSGFPPQKTGAFRSKERQ
VSEHKQNSNPPKFYNQERKLSPQLRKASQNGSSSQTEAFWSSGSDQSSEHKPDNASQQRR
STFQESKLTPPLSKLSDLPKQNIALGMKSSVYVAHTNTISDFYVHIAQNTDLSNISEILN
NEKGPSDQLDEKYVNLGDLICAFYEDGLYYRAVITEKCADGLLAQYIDYGNTSVIPPTKI
YKLPPSLLSIPAMSICCALDKCTTSACEQNMDDLMLKFSERTGDLELSCEFVQYNNRKWN
VILCDDQGCINDLFISVSGDPMLNPPLPKEPSVTSETLISASLFVWNLPELGETVEAFAS
AVDSPEHFWCQLATANVDSLAVKVQEAGEHSIHDGRFSAEIEVGSPCNVIYSDDNYWYRA
AVTKMKDDKVTVRFVDYGNEETLQMEQVRRLPADIAAIPVQAFPCSLANFNLSEGCWSSE
ANTFFYDKVTEGLLEITVLHIQELGLCKIPQASVNVKYNGEDINCEMRRFWQDSFVNTNP
FTESLNAKEETAIEDNVIPSQADEDDHSEPSEEPCASESIETPAVDGEVLTANDETKLEA
LPVSSAEEAAEITDNTDVELMRTEYLLHEVQKSSDLSCLELTLDEDVPDEKNSGTPAVTP
LAAEDLCIDYDESNIKKSYSGVTTEMDNRELHQDEDLDLWTSAAQDQEIASSEILGDVPI
DKECNYSVEEATDQSCTNIGLEEGPEPVENAFTENINDETDIANVQSKGEEEEAYLVPEE
STVAECEIEDFEPEVDLQSKENEGLPDIPLLEGDGDDSVSPEEVSSHEMNEAEGLEDQDQ
ELLGYTGTERAMDDYEVLQSEEQAEDLVPEEDPGTETEHRSYLFEAEEADLPSQEHKDFP
EQEEDRVAEHKNDISEPDLQSKEQKEDLVPEEDPGTETEHRSYLFEAEETDLPSQEHKDT
VTYTDIPLLEGGVDDFGSKETVSIDYNYEYVTEDVEDLDTENQESQICISGSDNRSKESG
PVDLQDFEDEVLFQYTEPTADSASDVRQGDECEFAAHSDENIESPEHPVHTDSTADVCET
DVCEPEVADHCHLQDKVVSERTECPVPDDRTKDDHQNNECQCAVDPVENIECQTPVCLVA
ADRSYTEYTWTVSETESGNMKNIEFQESPAEGDSVGSHGVGATEWKDGEPESLVNPDTPL
LEGPVSVDIMHSSDNFEPETDDMEQMEQDQGRMKIESSYVPAPSV
NT seq
5718 nt
NT seq
+upstream
nt +downstream
nt
atggtggaagtgtattttattgaccatgggaacacagaaatggtggactggtataatgta
aaaaagttgccagcagaacttagagaaatgccaggcttggccattcattgttgcgttgcc
gacatctgtcccctgggagtccgctggagtccagaagctatacttgcctttaaaattgca
gtggttgataaaaagcttataatctatgttgtgtccaaagaacttcataaatacattatt
gaagttttggacaattccagaatagagcagaggagcatggctaaaatactctcggcagca
gggcatgcaaaatatgaagaagtggaacctgtagctcagcataccggaaatatgagtgac
atagataatgaaacgcagcagcaatttttaggttacattaataaagatacaagttcactt
aaaactcagcagaaagaagatgtctgctcaatggaagatgacaacagtgtgccatactct
ccatatgaagatcaattctttgaaccaggtgctacaatagaagtggtagtgtcatgtatt
ataagccctggtttgttttggtgtcaaaatgcctcgctcagctccaaacttgaaaaactg
atggccaaaatacaagactattgttccagtacagattgtccttatgaaaggggtgcttat
gcatgtcttgcaaaaagttcctgtgatggcaaatggtacagagcatttataaccaacaat
aggccgggtagcaaagcaaatgcaaaccaagttgaagttctttatgtcgactacggcatc
acagaaactgttttagtgaaagacctccgctgcatagagagcgagctgtttgatttaaaa
gcgcaagccttcagatgtagtttgtacaaccttattgccccagacagtgagaaccccttt
gagtgggatacaaaagcaactttatcttttcataggtttgtcgattcttcagcaaaaaaa
tgttcagagtttaaatgcacatttttcgcaactgccttagtaaaaacagaactgtcttac
attgtagatgttttcactccttttgccagcatttgcaaattattagtagaattaggccat
gctaaacagttatctcacactacactggcaccgtcggtacagctgcaaacatattattac
tccatgcatgatattaaaattggtggtgaggaggaggtttatattacctatgtcaacagt
tccttggaattttactgtcagctttcaagaaataccgaaacgattgacatgatagcgtct
gctactgcacgtgtgtgcagtgaagtgagaaaatttgaattgtctgtaacacctgggccc
ttgtgtctggcaaagttcagtgatcagcaatggtatcgttgcttcattaatacaaataaa
aacagcactgatgcgttttttgtagattatggaaatacagaaaaagtgaacaaagaagaa
atgctgcctataccgagtgatgcctacgaactccttcattttccaatgcaagctattaaa
tgttctttatctgacatgcctgacaccgttcccagcgacgtggtgttgtggtttgaaaac
catgtacttgaaaaacccttaagggctataattgttgccaaagaaactgatggtaaattg
attgtagaattgtatgacggcagtcaacaaattaactcaatcctcaaaacgaaattggga
tggaagagttctcgtgctgaaggctcttttgggaattctgagaaaagaaaccagctaaat
gatttagacaggggtggaaggaaagagactacctcaaaatttcagccatacagccaggga
agcaaattctctccagatctggatggtcattctcagaatggtttaacttatcagaaacct
gagtttcagactaaagaaagagaacagtttgaacaaaagccaaatctgagaacacctcga
tcttataacaatgatagagaagtgtatcaagtacaaaagaatatgtcccaaagtgggttt
gcacctcagaaaacaggaggatttaggtctaaagacagagaagcatttgaacagagacca
aatcttaaagcctctggactgtacagccaggggagagaaacaccttcaatgtcacaaaat
agttcctacagtggttttccaccccagaaaacaggagcctttaggtctaaagaaagacaa
gtatcggaacacaaacagaattcgaatccaccgaagttctacaatcaggaacgtaaatta
tctccacagttgcgtaaagcttcacagaatggttcctcttcccaaacagaagcattttgg
tcttcaggaagtgatcagtcatctgagcacaagccagataatgcatctcaacagagaagg
tctacctttcaggaaagtaagctcacaccacctctgtcaaaattaagtgacctgccgaag
caaaacattgctctaggaatgaaatcatccgtgtatgttgcacacacaaatacaattagt
gatttttatgtgcatatcgcacaaaacactgaccttagtaacatttctgagatcttgaat
aatgaaaagggcccctctgatcaactagacgaaaaatatgtgaatttgggagacttaatt
tgtgcattttatgaagatgggctgtattatcgtgcggtcataacagaaaaatgtgctgat
gggttacttgcgcagtacatagattatggcaatacttcagtaatacctcccaccaagata
tataaacttccaccaagtttattgtctattccagcaatgagtatttgttgtgccttagat
aaatgtactacatcagcgtgtgagcagaatatggatgatttgatgcttaaattttctgaa
agaactggagatctagagttgagctgcgaatttgtgcaatataacaatcgcaagtggaac
gtaattttgtgtgatgatcaaggctgcataaatgacctctttatttctgtctctggagat
cctatgttaaatccacctttgcccaaagaacctagtgtaacttctgaaacattaatcagt
gccagtctttttgtgtggaaccttcctgaacttggtgagactgttgaagcttttgcaagt
gcggttgatagtcctgaacatttttggtgccagttggcgacagcgaatgttgactcttta
gcagttaaagttcaggaagctggagaacattccattcatgatggcagattcagtgcagag
atagaagttggttcaccttgtaacgtaatttacagtgatgataattattggtacagagct
gctgtaacaaagatgaaggacgataaagtgactgtacgattcgttgactatgggaatgaa
gaaacgcttcagatggaacaagtgcgaaggcttcctgctgatattgcagcaattcctgtt
caggcatttccatgttcccttgctaactttaatttatcagaggggtgctggagttcagag
gcaaatacctttttctatgataaagtcacagaagggcttttagaaatcactgtgctccat
atacaagaacttggactgtgtaaaattccacaagcttctgtaaatgtaaagtacaatgga
gaagatattaactgtgaaatgagacggttctggcaggacagttttgtaaacactaaccca
tttacagaatccctaaatgcaaaggaagaaactgcaattgaggataatgtcataccttcc
caggcagatgaggatgaccattctgagccaagtgaagaaccttgtgcgagcgaatcaatc
gagactccagcagtagatggggaagtactgactgcaaacgatgaaacaaagcttgaagcc
cttccggtttcttctgctgaggaagctgcagagatcaccgacaacacagatgttgagcta
atgaggactgaatatttattgcatgaagtccagaagagcagtgatttatcatgtttagag
ctgaccctggatgaagatgttccagatgagaagaattcaggcacaccagctgttactcca
ttagccgcagaagatttgtgtattgattacgatgaaagcaatatcaagaagtcctattca
ggtgttacaacagaaatggataatagggaattgcaccaggatgaagacctagacctttgg
acctcagctgctcaggatcaagaaattgcgagttcagaaatacttggtgatgtgcctatt
gataaagaatgtaactacagtgtggaagaagccacggaccaaagctgcactaacatagga
ctggaagagggccctgaaccagtggagaatgcattcactgagaacatcaatgatgagaca
gacattgctaatgtgcaaagcaaaggagaagaagaagaagcgtatctagtgccagaggag
agcacagttgctgaatgtgagattgaggattttgagccagaggttgatctgcagagcaaa
gaaaatgaaggcttacctgatattccattactggagggtgacggtgatgattcagtcagc
cctgaagaggtatccagtcatgaaatgaatgaagcagagggcttggaagatcaagaccaa
gagctattggggtatacaggcactgaacgcgcaatggacgattatgaagttctgcaaagt
gaagaacaagcagaggatttggtgccagaggaagacccaggtactgaaactgaacacagg
agttatctttttgaggcagaagaagctgatctgccaagtcaagaacacaaagactttcca
gagcaagaggaggaccgagttgcagaacacaagaatgatatttctgagccagacttgcaa
agtaaagagcaaaaagaggatttggttccagaggaagacccaggtactgaaactgaacac
aggagttatctttttgaggcagaagaaactgatctgccaagtcaagaacacaaagacaca
gtcacatatacagacattccattattagagggaggtgttgatgattttggaagcaaagaa
actgtatccatagattataattatgaatatgtaactgaggatgttgaggacttggatact
gaaaatcaagagagtcaaatatgcatcagtggctctgacaatcgatctaaggagtctggg
cctgttgacctgcaagactttgaagatgaagtgctgttccaatatacagagcctacagct
gacagcgctagtgatgtgcgtcagggagatgagtgtgaatttgcagcacattctgatgag
aacatagaaagtccagagcatccagtacacacagacagcactgctgatgtatgtgagact
gatgtttgtgagccagaagttgcagaccattgccatctacaagataaggtggtatcagaa
cgcacagagtgtccagtaccagatgaccgcactaaagacgatcaccagaataatgaatgc
cagtgtgcagttgatcctgtggaaaacatagaatgtcaaactccagtgtgcctggtggca
gcagaccgttcatatactgagtacacatggactgtcagtgagacagaatctggtaacatg
aaaaatatagaatttcaagagtctcctgcagaaggggacagtgtggggtcacacggtgtt
ggtgcaacagagtggaaagatggtgaaccagagagcctagtaaatccagacacaccgctt
cttgaggggccggtatctgtggatatcatgcacagcagtgataactttgagccagaaact
gatgacatggaacaaatggagcaagatcaaggacggatgaagattgagtccagctacgtc
ccagcccccagcgtgtag
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