Xenopus laevis (African clawed frog): 398304
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Entry
398304 CDS
T01010
Symbol
ncor1.S, ncor1, xn1
Name
(RefSeq) nuclear receptor corepressor 1
KO
K04650
nuclear receptor co-repressor 1
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
398304 (ncor1.S)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xla01009
]
398304 (ncor1.S)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xla03036
]
398304 (ncor1.S)
Protein phosphatases and associated proteins [BR:
xla01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
398304 (ncor1.S)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
398304 (ncor1.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
398304
NCBI-ProteinID:
NP_001082225
Xenbase:
XB-GENE-864966
UniProt:
Q8QG78
LinkDB
All DBs
Position
2S:complement(6607819..6728284)
Genome browser
AA seq
2498 aa
AA seq
DB search
MSSSGYPPNQGAFSTEQGRYSSHPVQYTFPSSRHQQEYSVSEYRTAHLEASQLIQQQQLR
RRPSLLSEFHPVSDRPQDRRSGYDQQYHSISQNEHEALESKRPRLDQVSDSHYRLNPAMV
LLVPTIQEGVRVQSEVKKEQGLSSKHESSSSPLSGQPGDDQDASPSKLSKEELIQSMDRV
DREIAKVEQQILKLKKKQQQLEEEAAKPPEPEKPVSPPPVEQKHRSVVQIIYDENRKKAE
EAHKFLEGLGPKVELPLYNQPSDTKVYHENIKTNQVMRKKLILFFKRRNHARKLREQNIC
QRYDQLMEAWEKKVDRIENNPRRKAKESKTREYYEKQFPEIRKQREQQERFQRVGQRGTG
MSATIARSEHEISEIIDGLSEQENNEKQMRQLSVIPPMMFDAEQRRVKFINTNGLMEDPM
KVYKDRQFMNVWTDHEKEIFKEKFVRHPKNFGLIASYLERKNVSDCVLYYYLTKKNENLK
SLVRRNYPKRRGRNQQQITRPSQEEKEIEKVEEEKADRNDKKEDERREEEEKEEKEELRE
GAKDKIDAVAEDGDEKDQSMPRGRKTANNQGRRKGRVTRSMASEAAAANAVTTATTAPVT
TTSTATTVAPVPVAPPPEEPTPPPPPQEQSLVDHGRNWGAIAKMVGSKSESQCKNFYFNY
KRRHNLDNLLQQHKQKSSRRPREERDVSQCDSIASTVSAQEDDENEASNEEENPEDSEGA
ENSSDTESAPSPSPAEAARLGDDSVDRTTSSVSMEAPPEQDAASKPASDSSPSPIVENTK
PPETQYAELKVKEEISTENEQTMEVEERSQSAELKSALNLQVQTKAEPYETEAKPTESTT
QVKTEVDSKEDDSMERLMDRAEAADMGYAPPQNISQARQESQPDNDSSATCSADEEVDGE
PDRPRMYSFGSRPSLLNQAGTFLKQGPMDLQQLQHRAAVIPPMTSCSPCNLTTGTAIAAS
NFSMYQRHLYENSLLEEQRQRQEQLTLENRMSASPGNMSKSPNMDWEGKSVYMPYTEVKH
PFEHEAQMQNVARSVSPYRLSPRDVGRVSPQVDMNPSRYCVPPVLQPAPHQVITSLSDSA
RLPVTRPTRPPPPLIPSSKTSATSSDKPSFITGGSISQGTPGTYLASLSQPYSQETLKPS
VGSISLGLPRQHESTKIGCVTYIKQEEFPSRGQSSQPEGLLVRAQHEGVVRGSMAAIQEG
SIARGTPATKVPLEAVSTLRGSITQGTPALSQSGIAADVLLKSTITRLAAEDIGSPERCR
EDTSAKGHVIYEGKSGHIVSYDTIKNMREGTRSPRTAPEVALKRAYDTMEGNIKQAMSVR
EAAVSGPMEGLICRTLPKGSPHPELKDRQVLSGSIMKGTPRTTSDNFDDGLKYAKQIKLE
SPPIRSFEGAISKGKPYEGVTTIKELGRSIHEIPRQDLVSQESRKTPESSRQIMEGSISQ
GTPIKYESTSGQSAIKHNVKSLITGPSNLSWGVPQMDNMPENLKMGERSKHEDTKSSDAI
RSRHTSVVSSGPSVLRSTLHEASKSQLSPGIYEDNNARRTPVNYPSPMSRSSPMARSAEG
CLTPSKSSSHERKSTLTPTQRESIVVKSPVPGVDPSAAHSPFDTHLRSAPPGDVYRAHLP
PHLDPALQFHRPLDPAAAAYLFQRQLSPTPGYPSQYQLYAMENTRQTILNDYITSQQMQV
NLRPDVARGLSPRDQGLGIPYPGARGIIDLTNMPPAILVPHPGGTSTPPMDRITYIPGTQ
LAFPPRPYNPASMSPGHPAHLANSVSAERERERERERERDREREKEQRERESDRERERDR
LAHAAAAAAAASAPSEHYLRPVSEQPSRPSSRPSSHGYVRSPSPSVRAQESIMQQRPSIF
LGTNGKSVITPLDAAQFRIMPPTPGAASITQGIPASRYSTAADALAALVDAATSAPQMEV
AKPKESKNDSARSEENLSRRNALEQQQQIDCERRVMQSPYTSSSFSSSKSQSQPSSAVYS
EAGKERTAHTKSRYVEELRMRGKTTITAANFIDVIITQQIASDKDGRERNSQSSDASSSH
SSHRYEAPRETIEVISPANSPVQEKESYPQEMPKSSQTETGEGSRKYDGQPNRYRQQQES
PPQQTIPGHVPQTHRLITLADHICHIITQDFARNQPVNQPLQQPPASTFQSTNPTSTAVR
TKASSRFSPESQVQPMHSPRPASRVSPENIPDKPRGRPGKSPDRGHISEPYEPISPPQAP
MLHTKQDNMMLLSQRQEPPEQRNDSRSPGNINYLPSFFTKLENTSPMVMYKKQEIFRKLN
SSGGGDSDMAAAQPGTEIFNLPAVTTSGAISSRGHSFADPASNLGLEDIIRKALMGNFDD
KSEDHGVLVGVPQGNQSGTPNSEARREEANPSPNSGGGTHKQKLISKYGSRKTKSPISGS
QTYLGAERPSSVSSVHSEGDYRQASAWAWEDRPSSTGSTQFPYNPLTMGMLNSTPPSSMS
CIPTSMTQTSAHQQSRIWEREPAPLLSEQYETLSDSDE
NT seq
7497 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagttcaggataccctcccaatcaaggagctttcagcaccgaacagggtcgatat
tcttctcatcctgtacaatacactttccccagcagccgacatcagcaggaatattctgtt
tctgagtatcggactgctcacttggaagcatcccagctgatacagcagcagcagcttcga
aggcgtccttcattgttgtcagaatttcacccagtgtccgacagaccccaggacagaaga
tcaggctatgatcaacaataccattccatttcccaaaatgagcatgaagccctggaatcc
aagcgaccccgattagaccaagtgtcggattctcattacagactcaaccctgcaatggtg
cttttggtacccaccatccaggagggtgtccgagtgcaaagtgaagttaagaaggagcag
ggtttgtccagcaaacatgagtcttcttcgtcacctctttctgggcaacctggagatgat
caggatgcttctccatcgaaactttcgaaagaagaactaatacaaagtatggaccgtgtg
gaccgtgagattgctaaagttgaacagcaaatattaaagctgaagaaaaaacagcaacag
cttgaagaagaagcagcgaaacctccagagccagagaagcccgtctcccctccacctgtg
gaacagaagcatcgcagtgtagtccagattatttatgatgagaaccggaaaaaagcagag
gaagcacacaagttcttagaaggtctaggtccaaaagtagaactgcctctttataaccag
ccctcagacacaaaagtttatcatgaaaacatcaagacgaatcaggtgatgaggaaaaag
cttatactgttctttaagagacgaaatcatgctaggaaactaagggaacagaacatttgt
cagcgctatgatcagctgatggaggcctgggagaagaaagttgacaggatagaaaataat
cctcgaagaaaagcgaaggagagcaaaacaagagaatattatgagaagcaatttcctgaa
atccggaagcagagagagcagcaggagcgttttcaaagggttgggcaaagaggaactgga
atgtcagcaaccatagccaggagtgagcatgaaatatctgaaataattgacggcctttca
gaacaggagaataacgaaaagcagatgcgacaactctcagtcattccacccatgatgttt
gatgcagagcaaaggagggtgaaatttattaatacgaatggtttgatggaggatcccatg
aaggtgtacaaggatcggcagttcatgaatgtatggactgaccacgagaaggagattttt
aaagaaaaatttgtacggcaccctaaaaactttggactgatcgcctcgtatctggaaaga
aagaatgtttcagactgcgttttatattattatttaactaagaaaaatgaaaatttgaaa
tcccttgtgagaagaaactatcctaagaggagaggacgcaaccagcaacagataacacgc
ccttcccaagaagaaaaggaaattgaaaaagtagaggaggagaaagcagatagaaatgac
aaaaaggaagatgaaaggagggaagaagaagaaaaagaggagaaagaggagcttagggag
ggcgccaaagacaaaattgatgctgtagctgaagatggggatgaaaaagatcaatccatg
ccaaggggtcgtaaaactgccaataaccaaggcagacgaaagggtcgagttaccagatcc
atggcaagtgaagctgctgcggccaatgctgttaccacggcaactactgctccagtcacc
accactagcactgccaccactgttgcacctgttcctgtggcaccacctccagaggaacca
actcctcctccaccaccacaagagcaaagtctggtcgatcatggtcggaactggggagca
attgccaagatggtgggatcaaaaagcgaatcccagtgtaaaaatttctactttaactac
aagagacgacacaatctagacaatttgcttcagcagcacaaacagaagtcatcccggagg
cctcgagaggaacgcgatgtgtctcaatgtgacagtattgcttctactgtatctgcacag
gaagatgatgaaaatgaagcctctaatgaggaggaaaaccctgaagacagtgaaggtgca
gaaaacagttcagacactgaaagtgccccatctccttcccctgctgaagcagccagatta
ggcgatgactctgttgatagaaccacttcttcggtatccatggaagctcctccagaacaa
gatgctgctagcaaacctgcttcagattcatctccctctcctatagtagaaaatacaaag
cccccagagactcaatatgcagagcttaaagtgaaggaagaaataagcacagagaatgag
cagacaatggaggtggaagagagaagtcagagtgcagaactaaaatcagcacttaatctc
caagtacagactaaagcagaaccatatgagacagaagcaaaaccaactgagagtactaca
caagtgaaaacagaggttgactccaaagaggatgactccatggaaaggttaatggataga
gcagaggcggctgatatgggatatgcaccaccccaaaacattagtcaggccaggcaagag
tcacagccagacaatgactccagcgctacctgcagtgctgatgaggaggttgatggagaa
cctgacaggccaaggatgtattctttcggttcaaggccttccctgctgaatcaggcggga
acttttttaaaacaaggaccaatggatttacaacagttacagcaccgagctgctgtaata
cctccaatgacatcctgtagtccttgcaatttaactacgggaacagctatagcagcgagc
aacttttctatgtaccagagacatctctatgaaaatagtctcctagaagagcaaagacag
agacaagaacagctgactttggaaaacagaatgtcagccagcccaggaaacatgtctaag
agcccaaatatggattgggaaggaaaatcagtctatatgccttacactgaagtcaagcat
ccttttgagcatgaagcacaaatgcaaaatgttgctcggtctgtttcaccataccggctc
tctcctagagatgtcggcagagtttctccacaagtagatatgaatccgtctcgttactgt
gtccctccagtattacagcctgctccacatcaagtcattacctccttatcagatagtgca
aggctgccagtgactcgcccaacccgtcctcccccacctctgatcccgtcctccaaaact
tcagcaacttcttctgataagccatctttcattacaggaggctcaatatcacagggaaca
cctggcacttacttagcgtcactcagccaaccttacagccaggaaacattgaagccctct
gtgggttccatctcccttggcctaccaaggcaacatgaatctacaaaaattggctgtgtg
acctacatcaagcaagaagagtttccttctcgaggccagagttctcagcctgaaggacta
ctagtcagagcacagcatgaaggtgttgtcagaggctccatggctgcaattcaggagggg
agcatcgctagaggcactccagcaaccaaagttccattggaagcagtttccacccttcgt
gggtccattactcagggtacaccagctctttcacagtctggtattgctgctgatgttttg
ttaaagtccaccatcactagactggcagcagaggatattggtagtccggagaggtgcagg
gaggatacctctgctaaagggcatgttatatatgaaggcaagagtgggcacattgtatct
tatgacactatcaagaatatgcgagaaggaaccaggagcccaaggacagcacctgaggtg
gctctgaagagagcatatgataccatggagggaaatattaagcaagccatgtctgtaaga
gaagccgctgtatcaggacctatggaaggactgatatgtcgtacactgcctaaaggaagt
ccacatccagaactcaaagataggcaagtcttgtctggttcaatcatgaaaggcactccg
agaacaacatcagacaactttgatgatggccttaagtatgcaaagcaaataaaacttgaa
agtccgcctataagatcctttgagggagccatctcaaaaggcaaaccttatgagggtgtc
accacgattaaagagctggggcgatctattcatgaaattcccagacaagatcttgtaagc
caagaaagtcgcaagactcctgaaagttcaaggcaaataatggaaggttccatttcacag
ggcacacccataaaatatgaaagcacttcagggcagtctgctatcaaacacaatgtgaag
tctctgataacaggcccaagtaatctatcctggggagtacctcagatggacaatatgccc
gaaaatttaaaaatgggggaacgttcaaaacacgaagacaccaaatcatctgacgccatc
agatcacgccatacgtctgttgtcagctcaggtccatctgtgctccgatcaaccttgcat
gaagcttctaagtctcagttaagtcctgggatttatgaagacaataatgctagaaggact
ccagtcaattaccccagtcccatgtcaagaagctcacctatggcacgctcagcagaaggt
tgtcttaccccatccaagtcttccagccatgaaagaaaaagcactttgactcccacccag
agagagagcatagttgtgaagtcacctgttcctggtgtggacccttctgcagcacacagt
ccctttgacactcatctccgaagtgctccacctggagatgtttatagagcacatttgcct
cctcacctagatcctgctcttcagttccacagaccattagacccagctgctgctgcttac
ctgttccaaaggcagctgtcacccacacctggttaccctagtcagtaccaactgtatgcc
atggagaacacaaggcagacaatcctaaatgactacataacctcgcaacagatgcaggtt
aatttgaggccggatgttgctagaggactttccccaagagatcagggactaggtattcca
tatcctggagccagagggattattgaccttaccaatatgcctccagcaatactggtccct
catccaggtggcacaagtacaccacccatggacaggattacttacattcctggcacacaa
ctggcttttcctcctaggccttacaaccctgcgtccatgtctccaggacatcctgcacat
ttagcaaattctgtcagtgctgaacgggaaagggaaagagagcgggagagggaaagagat
cgagagagagaaaaggagcaacgtgaaagggaaagtgatcgtgagcgagaaagagatcgg
cttgctcatgctgctgctgctgctgctgctgcttctgctcctagtgaacattacctacga
cctgtcagcgaacagccaagcaggccgagtagcaggccgagtagtcatgggtatgtgcgc
tcaccgtcgccttcagtcagagctcaggaaagtattatgcagcaaaggccaagtattttc
ctgggaactaatggaaaaagtgtcatcacacccttggatgcagctcagtttcggatcatg
cctccgactccaggagcagcctcaattacacaggggatacctgcctcccgttacagcaca
gctgcggatgcattggccgcacttgttgatgcagcaacttctgctcctcaaatggaagtt
gccaagccaaaggaaagcaaaaatgactctgcacgtagcgaagagaatctaagcaggcgt
aatgcactggagcagcagcaacagatcgactgtgaacggagggtcatgcagagcccttac
acatcctccagtttctctagcagcaagtcacagagccagccttcctctgctgtctattca
gaagcaggcaaagaaagaacagcgcacacaaagtcacgctatgtagaggagctacgaatg
cgagggaagaccactatcactgctgccaacttcattgatgttataatcactcagcagatc
gcttctgacaaagatggtagagagagaaattcacagagctcggatgcttcaagcagtcat
tcatcacatcgatatgaagctcccagagaaactatagaagttatcagtccagcaaattca
ccagttcaggaaaaggagtcctacccacaagagatgcccaaatcaagccaaactgagaca
ggtgaaggcagccggaaatatgatgggcagcccaatcgctaccggcaacagcaagagtct
cctccgcaacagaccattccagggcatgtaccacaaactcatcgcctcatcacgttagct
gatcacatatgtcatattattacccaagactttgccaggaatcaaccagtaaaccaacct
ttgcagcaacctcctgcatctacattccagagcactaaccctacatccacagcagtgcga
acgaaggcatccagcaggttcagccccgaatctcaagtacagcctatgcatagtccgcgc
cctgcctctagggtgtctccggaaaacatacccgacaaacccagaggaaggcctggaaag
tctcctgacagaggacacatctctgagccatacgagcctatctcacctccacaagcacct
atgttgcatactaaacaagacaatatgatgttactttcccagaggcaggagccccctgag
cagagaaacgactcccgttcccctggaaatattaattatctgccctcattcttcactaaa
ttggaaaatacgtccccaatggtgatgtataagaagcaagagatctttcgcaagttgaac
tcttctggtggtggtgactctgacatggcagctgcacaaccaggcacggagatatttaac
ctgccggcagtcactacctctggtgcaatcagctctcggggccattcttttgctgaccca
gccagtaacctaggcctggaggacattatccgcaaagcactaatgggcaacttcgatgat
aaatcagaagatcacggtgtattggtgggagtaccacaagggaaccaatcagggacccct
aacagtgaagcacgtagagaagaggcgaacccatcacctaattcaggcggaggaacccac
aagcaaaagttgataagcaaatatggcagtcgcaaaacgaagtcacccatatctggcagt
cagacatacttgggggctgaacggccctcttctgtctcctctgttcattccgaaggagat
tacaggcaggcttcagcatgggcctgggaagaccgaccttcttccacaggttcaactcag
tttccatacaatcctctaaccatgggaatgctgaacagcacaccgccatcctctatgtcc
tgcattcccacatccatgactcagacctctgcacaccagcagagccgaatctgggagagg
gaacctgcacctcttctttctgaacagtatgaaactctgtcagacagcgatgagtga
DBGET
integrated database retrieval system
