Xenopus laevis (African clawed frog): 398350
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Entry
398350 CDS
T01010
Symbol
gli1.S
Name
(RefSeq) zinc finger protein GLI1 isoform X1
KO
K16797
zinc finger protein GLI1
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
398350 (gli1.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
398350 (gli1.S)
Transcription factors [BR:
xla03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
398350 (gli1.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
Zap1_zf1
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
398350
NCBI-ProteinID:
XP_018105561
Xenbase:
XB-GENE-864895
UniProt:
A0A1L8HA22
A0A974DKW4
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All DBs
Position
2S:132027137..132113761
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AA seq
1361 aa
AA seq
DB search
MASRQCPPAAVFNSMNPPVNSYVEHCYLRSPNVMAEGMSEMPYCHQTNLMTSHHGFGLAQ
ASDHLAGTDGSRFSTPRSTMKLSKKRAMSISPLSDASIDLQTMIRTSPNSLVAFINSRCP
SASGSYGHLSIGTISPSLGYQNCLNHQRPQGGSYGNNPLMSYNSHEHLSSRGVGMLQPRS
TVKHCQLKSEPLSSTGLDSIGSKRLDDVSEGDISSPASVGTQDPLLGLLDGRDDLEKDDG
KHEPEIVYETNCHWESCTKEFDTQEHLVHHINNEHIHGEKKEFVCHWQDCSRELRPFKAQ
YMLVVHMRRHTGEKPHKCTFEGCNKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNA
SDRAKHQNRTHSNEKPYVCKIPGCTKRYTDPSSLRKHVKTVHGPEAHITKKHRGDGMLRA
QPGHEGPGNQNVKGENQLDMEASSACKEDGRLAVPDITLKSQPSPGGQSSCSSERSPLGS
TNNNDSGVEMNANTGGSFEDLTNLDDIPSVDSMGTAGASALRKLENLRIDKLNQLRKTPS
SGKMVKLPSIHNSGPQGDMSVVCGPLGMSHNQHGIELPASSHVNHLNDRRNSTTSTMSSA
YTVSRRSSVVSPYPPNQRAGDSGNMVDSYDISTDPSGHSNEAVCASGLPGLTPAQQYRLK
AKYAAATGGPPPTPLPNMERMNTNNRMAFASSDYRGSAISSLQRRHSSNEYHNYGTGIIH
PAQAPGAGIRRASDPARTGGDIQAVPKVQRFKSMTNMNVSMMGRQGTSIQQAYGGSDANL
QRHMFSPRPPSITENVFMETAGPDEVCHTKEQGFIQSNEMQHYMNYQGQGSQLTAPNDHM
NFNPQIHGLDGQSQNVYSHSQRAISNMHLNAENYSGQSNVSNFNQCQMTAHNQHFQNTRQ
AYNCANLPVQWNEVSSGTMDNPVQRPNHQIMHQNMSPGNHCQSQLSNCTVPESTKQGCPV
NRNSCQQGMYMNNQKYNHGGQVQVKPEQQFHHSAPAMMSCQNMKHPSRQEHHFTKTNTMP
LSSEATNCDYQGQQDSTQNSCFNVGLNPNLLSPPGRRSQTPIMQVKEIMVRNYVQSQQAL
MWEQHPKSMAMMTNSGDDVDTGQNQHKNTPNAAVYMGPKYMNYQGKPSPNNLMSPSSQDS
QSSHTKAMGSPSSQCYNFDMMPHPPCGPKPLSRQHSVSSQSTYMGSPNQLSPSYQSSESS
PRRMACLPPIQPQSEVTNNTSMMYYTGQMEMHQSKPGVHKLTTPLNLNQTSCDGHQHGQY
NASHSFLKTVPYTSSCPAANTLDSLDLENTQIDFTAIIDDADNALMPGNISPNVLAGSSQ
ASSHLTTLRNTGAVVPNMVVGDLNSMLSSLAGENKYLNTMS
NT seq
4086 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcccgccagtgtccgcccgctgctgtgtttaactccatgaaccctcctgtgaac
agctatgtggagcattgctacctgaggtctcctaatgttatggcggaaggaatgagtgaa
atgccgtactgccatcaaaccaaccttatgaccagtcaccatggatttggattggcacaa
gccagcgatcatttggcaggtacagatggatcgcgtttctctactcctcgaagtacaatg
aagctgagcaaaaagagagctatgtccatctccccgctgtcggatgccagcattgatcta
caaaccatgatcaggacctctcccaattccttggttgctttcattaattctcgatgtcct
tcagctagtgggtcttatggccacctgtctattggaactatcagcccatcccttggttat
caaaattgccttaaccatcagagaccacaagggggatcttacggaaacaacccactcatg
tcttacaactcccatgaacacctgtccagcagaggagtgggcatgctccaacctcgcagc
acagtcaagcactgtcagttgaagtcagagccattgtcaagcactggtttggattcaatt
gggagtaaaagattagatgatgtatccgaaggagatatatctagtcctgcttctgttgga
acacaggacccactgcttggattgctggatgggcgtgatgacttggagaaggatgatggc
aaacatgagccggaaatagtgtacgagaccaactgtcactgggaaagctgtactaaggag
tttgacactcaggaacatcttgttcatcacataaacaatgagcatatccatggggaaaag
aaggagtttgtgtgccactggcaagactgttcgcgagaactcagaccctttaaggcacaa
tatatgctggtggtccatatgaggaggcacacaggagagaaacctcacaaatgcacattt
gagggatgtaacaaggcttattcacgacttgagaacttgaagactcacctgaggtcccat
accggtgaaaaaccttatgtatgtgagcatgagggctgcaacaaggccttctccaatgcc
tccgacagagccaagcaccaaaaccgaactcactctaatgagaaaccatatgtatgcaag
atccccggctgcaccaagcgctacacagatcctagttctctcaggaagcatgttaaaact
gtacatggcccggaggcacacattaccaagaagcaccgtggagatgggatgctcagggct
cagcccggtcacgagggacctgggaatcaaaatgttaaaggggaaaatcagctggatatg
gaagcaagctcagcttgcaaggaagatggaagacttgctgtgccagatataactttgaag
tctcagcccagtcctggtggacagtcatcttgcagcagtgaaaggtcccctttgggaagc
accaacaataatgatagcggtgtggaaatgaatgccaacacaggaggaagctttgaggac
ctcaccaacctagatgatattccttctgtagattcaatgggcactgcaggtgcttcagcc
ctaagaaagttggagaatcttaggattgacaaactgaaccaactacgtaaaaccccatcc
tcaggaaagatggtcaaactgccttctatccacaacagtggtcctcagggagatatgtct
gttgtctgcggaccactgggtatgtctcacaatcaacatggtatagaattgccagccagc
agccatgtaaatcaccttaatgacaggaggaacagcactacaagcaccatgagctcagcc
tatactgtgagccgcagatcctcagtggtgtccccatacccacccaatcaaagagcaggt
gattctggcaacatggtggattcgtatgacatttctacagacccttctggacattctaat
gaagctgtttgtgctagtgggcttccgggccttactcctgcacagcaatatagattaaag
gcaaagtatgctgcagcaacaggtggtcctcctcctaccccactgcccaacatggagagg
atgaatacaaataacaggatggcatttgcttctagtgattatcgtggatcagccatctct
tccctacagagaagacatagtagcaatgagtatcacaactatggaacaggtattattcac
ccagctcaagcaccaggtgctggaataagaagagctagtgaccctgcaagaactggggga
gatattcaagcagtgccaaaagtgcagcgcttcaagagtatgacaaatatgaatgtatct
atgatggggagacaaggtaccagtattcagcaagcatatggaggatctgatgctaattta
caaagacatatgttttctccacggcctcccagcattactgagaatgtttttatggaaaca
gcaggtcccgatgaagtatgccatacaaaggaacaaggctttatccagtctaatgaaatg
cagcactatatgaactaccagggtcaaggatctcagctgactgcacccaatgaccatatg
aactttaatccccaaattcatgggttagatggtcaaagccaaaatgtctacagccattcc
cagcgagctatcagcaacatgcatctaaatgcagagaattactcaggccagagtaatgtt
tcaaatttcaaccagtgtcaaatgactgctcataaccagcattttcagaacacaaggcaa
gcgtacaactgtgctaatttacctgtacagtggaatgaggttagttcaggaaccatggac
aaccctgtccaaaggccaaatcaccaaattatgcatcaaaatatgtcacctggaaatcat
tgccagagtcagctctcaaactgtacagtcccagaatcaacaaagcagggttgtcctgta
aacagaaattcatgccagcagggaatgtatatgaataatcagaaatataaccatgggggt
caggtgcaggttaagcctgaacaacagttccaccattcagctcctgccatgatgtcctgt
caaaacatgaaacatccttctagacaagagcatcattttacaaagacaaatacaatgcct
ttgtcatctgaagcaacaaactgtgattaccaagggcaacaagacagcactcagaactct
tgcttcaatgttggccttaaccctaatttgctaagccctccagggcgtaggtctcagaca
cccataatgcaggtgaaggaaataatggtcagaaactatgtccagtcccaacaagcgcta
atgtgggagcaacatccaaaaagtatggccatgatgaccaacagtggggatgatgtagac
actgggcaaaaccagcacaagaatactcctaatgctgctgtttatatgggtcctaagtat
atgaattatcagggcaagccatcaccaaacaacctaatgagcccaagctctcaagacagc
cagtctagtcacaccaaagcaatgggaagcccaagcagtcagtgttacaactttgacatg
atgccccatcccccctgtggccccaaacctttaagcaggcaacacagtgtatcaagtcag
tcaacatacatgggtagtccaaatcagcttagtccatcttaccagtcatctgaatcaagc
ccaagaagaatggcctgccttcctccaattcagcctcagtctgaagtcaccaataataca
agcatgatgtattacacaggtcaaatggaaatgcatcaaagtaaaccaggggtccataaa
cttactacaccactaaatctaaaccagaccagctgtgatggacatcaacatggccagtac
aatgcaagtcatagctttctaaagacagtgccttacacaagttcatgtccagctgccaat
acattggacagtcttgatctggagaatacacaaattgattttacagcaattatagatgat
gcagataatgctttgatgcctgggaatattagccccaatgtactagcaggaagttctcaa
gcttcctcacacttgaccacactgcgaaatacaggagctgttgttccaaacatggtggtg
ggggacttgaactcaatgttaagttctctggccggagagaataagtacctaaacacaatg
tcctga
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