Xenopus laevis (African clawed frog): 398374
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Entry
398374 CDS
T01010
Symbol
nup153.L, n153, nup153
Name
(RefSeq) nuclear pore complex protein Nup153
KO
K14296
nuclear pore complex protein Nup153
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03013
Nucleocytoplasmic transport
xla03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
398374 (nup153.L)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
398374 (nup153.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xla03019
]
398374 (nup153.L)
Messenger RNA biogenesis [BR:
xla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
398374 (nup153.L)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nucleoporin_FG
Nup_retrotrp_bd
Motif
Other DBs
NCBI-GeneID:
398374
NCBI-ProteinID:
NP_001082284
Xenbase:
XB-GENE-6251581
UniProt:
Q640Z6
LinkDB
All DBs
Position
6L:98219844..98283114
Genome browser
AA seq
1605 aa
AA seq
DB search
MAAAGGGGPGGPGTGGKIRSRRYHLSSGRTPYSKSRQQQQGIISRVTDTVKSIVPGWLQK
YFNKQEEEHDRVHSASEVIVNDTEARENNAEHHIYVVDDDDDEEGNSPTDGRVTPEPIIN
VDEEVPSTSQSAINNTDALTRPSLHRASLNFNIFDSPALNCQPSTSSAFPIGTSGFSLIK
EIKDSTSQHDDDNISTTSGFSSRASDKDLAVSKNVSVPPLWSPEVDRSQSLSHNSSMTSK
KPTFNLSAFGSLSPSLGNASILNRQLGDSPFYPGKTTYQGAAAVRSSRVRATPYQAPLRR
QVKAKPAAHSQQCGVTSSAARRILQSLEKMSSPLADAKRIPSNSSLSHTPEKNVMDIPEN
PSKRKKVESPFPPVQRLVTPKSISVSANRSLYIKPSLTPSAVSNTNSRRIQPDKHNESRK
NNLQTTSQSHSFSYPKFSTPASNGLSSGTGGGKMMREKGSHYSTKPANEELDGPVLPEIP
LPLSTAALPSFQFSTLSGSATSPISVTKPANSTTCRLTSSSPSFTFSSPIVKSTESNAQS
PGSSVDFTFSVPAAKASSATSDESKVSAVSRAAKTHAAVSSAKNTDDEQLGFCKPAKTLK
EGSVLDMLRSPGFSSSPSLLTSASSLNRSTPTLSKTVGNTFSPANVSLGVGSKQAFGLWQ
CSACFHENMSSDSNCISCSALKPRPTETSKKLPASPPSSNTKSTVPLSSTPGLGDIFKKP
AGMWDCDTCLVQNKAEVTKCVACETPKPGTGMKATLLIPSTTKSTNPATNTLAFASCSAS
IPNEEMFKKPMGSWECTVCHMQNKTEDNTCVGCKAEKPGTVKSVPTAAPSGLLGLLDQFK
KPTGSWDCDVCLIQNKPEANKCIACESAKPGTKAELKGTFDTVKNSVSVAPLSSGQLGLL
DQFKKSAGSWDCDVCLVENKPEATKCVACETSKPGTKAELKGFGTSTFSSGTAAPTFKFG
VQSSDSTAELKSGASTSGFAKSIGNFKFGLASASTTTEETGKKSFTFGSSTTNEVSAGFK
FGIAGSAQTKPDTLSQSTTSGFTFGSVSNTVSLAPTATSSGSTGLQVAAVIADSNLATTA
TLKSAEEKKAEAPTITPFSFGKTDQNKETASTSFVFGKKDEKTDSAPTGSSFAFGLKKDG
EESKQFLFGKPEPTKVDGSAASAGFAFGVTNPTEKKDIEQPGKSVFAFGAQTSITDAGAS
KQPFSFLTNVSSTAASSSTCGVSSSVFGSVTQSSTPATPSNVFGSAISANAPAPSSGVFG
NLTPSNAPAASSTLFGNVAPSSTPSGSSGLFGTAAASSTPATSTSLFGSAAKLSAPASSG
GVFNSAAPAAPASTASSVFGSVASSTNTSANSANIFGSSGGAATAPGAFVFGQPASTAST
VFGNSSESKSTFVFSGQENKPVTSASTSVTPFLFGAVSASTTPAAPGFNFGRTITSNTTG
TSSSPFIFGAGASGSASSSITAQANPVPAFGQSSNPSTAPAFGSSTSVPVFPAGNSQQVP
AFGSSSAQPPVFGQQATQPSFGSPAAPSAGSGFPFGNNANFNFNSTNSSGGVFTFNANSG
STTQPPPPGYMFNAAAPGFNMGTNGRTTPASTISTRKIKTARRRK
NT seq
4818 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagccggaggaggaggccctggtggtccaggaaccgggggcaaaatacgcagt
aggagatatcacttgagttccggcaggactccgtacagcaagagccggcagcagcagcag
ggtatcatcagccgtgtcacggatactgtcaagagcattgttcctggatggttgcagaag
tattttaacaaacaagaagaggaacatgaccgagtacatagtgcaagtgaagtaattgtg
aatgatactgaggctagagaaaataatgctgaacaccatatctatgttgttgatgatgat
gatgacgaagaaggaaattctcccactgatggcagagtcactcctgagccaattattaat
gttgatgaagaagttccgtccactagtcagtcagcaataaacaacacagatgcccttact
aggccatctttacaccgtgctagtctaaacttcaacatatttgactctcctgcactgaac
tgccagccttcaacctcttcggcatttcctattggcacctctggcttctcacttataaaa
gagatcaaggactctacctcgcaacatgatgacgataacatctccaccaccagtggcttt
tcctctagagcatctgataaggatctagccgtttcaaaaaatgtcagcgtgccacctctt
tggtctcctgaagttgatcgctcacagtctctgtcacataactcctccatgacctccaaa
aaaccaacttttaatctttctgctttcggttctctctcaccttctcttggaaacgcatct
atcttaaaccgtcagcttggtgattctcctttttatcctggcaaaacaacataccaaggt
gcagctgcagtccgttcctcgcgagtgcgcgccaccccatatcaagcacctttacgaaga
caggtgaaggcaaaaccagcagcacactctcagcagtgtggtgttaccagctccgctgca
cgccgcattctacagtctttggagaagatgtcaagtcctttagcggatgccaaaaggatc
ccatcaaactcttctttatcacatacaccagaaaagaacgtcatggatattcccgaaaac
ccatcaaaaaggaaaaaggtggagtccccatttcctccagttcagaggcttgtgactcca
aaatccatttctgtctctgcaaaccgttccctgtatatcaagccttcactgacaccatca
gctgtatcaaatacaaacagtcgcagaatacagccagacaagcacaatgagtctagaaag
aataatctgcaaacaacatctcagtctcacagcttctcttacccaaagttcagtactccg
gcatccaatggattgtcatcaggaacaggtggtggcaaaatgatgagggaaaaaggctct
cattactcaacaaaaccagctaatgaggagctggatgggcctgttttacctgaaatccca
ttgcctcttagcacagcagcccttcccagctttcaattttcaactttgtctggctctgct
acttcgcctatctctgtcactaaacctgcaaacagtacgacatgtcgcttaaccagcagt
agcccatcgttcacattttcgtcccctattgtaaagtcgactgaatcaaatgctcagtct
cctggctcatctgttgatttcactttcagtgtaccagcagcgaaagcgtcttctgcaaca
tctgatgagagcaaggtgtctgctgtaagtagagcggctaaaacacatgctgctgttagc
agtgcaaagaacactgatgatgaacaattgggattctgtaaacctgcaaaaactctgaag
gaagggagtgtgttagacatgctgagaagtccagggttttcttcttcaccctccctgctg
acttcagcatcaagtcttaacagaagcacaccaaccctctcaaagactgtggggaataca
ttctcccctgcaaatgtatcattaggagtaggaagcaagcaagcttttggactttggcaa
tgcagcgcatgctttcatgagaatatgtcatctgatagcaactgtatttcttgctctgct
ttaaaacctcggcctacagaaacctctaagaaactacctgcttcaccgccaagtagcaat
acaaaaagcactgtcccactttctagcacaccaggactaggagacatatttaaaaaacct
gcaggcatgtgggattgtgacacttgtttagtacagaacaaagcagaagtaacaaaatgt
gttgcttgtgaaacccccaaacctgggactggtatgaaagctaccttgttgataccgtcc
accacaaagtctacaaatcccgccacaaatactcttgcttttgcatcttgctctgcaagc
attccaaatgaagaaatgttcaaaaagcctatgggatcttgggagtgcacagtttgccat
atgcagaataaaactgaggataatacatgtgttggctgcaaagctgagaaacctggaacc
gtcaagagcgtacctactgctgcaccatcagggctgctgggattgttagatcagtttaaa
aaaccaacagggagctgggattgtgatgtctgcttaatacaaaacaaaccagaagccaac
aaatgtattgcatgtgaaagtgccaaaccaggcaccaaagcagaactgaaaggtactttt
gatacagtgaaaaattcagtttcagttgcacccctttcttcagggcagctgggattgcta
gatcagtttaagaagtcagcaggaagctgggattgtgatgtctgcctagtagaaaacaaa
ccagaagccacaaaatgtgttgcctgtgagacctcaaaaccaggcacaaaagcagagtta
aaaggttttggaacatcaaccttttcctctggaacagcagctccgacgttcaagtttggt
gtgcagtcttcagatagcactgctgagttaaaatcgggtgcctctacaagtggttttgcc
aaatctatagggaattttaaatttggtttagcgtctgcatccacaacaacagaggaaact
ggcaagaaaagctttacatttggctcttctactaccaatgaagtttcagcaggttttaag
tttggcattgccggctctgctcagacaaaaccagacaccctaagtcagtctaccacaagt
ggtttcacatttggctctgtttccaacacggtttctcttgctcctactgcaactagctca
gggagcacaggcttgcaagtggcggctgtaattgctgattccaaccttgcaactactgct
accttaaaatcagcagaagagaaaaaggccgaagcacctacaataacaccgttttctttt
gggaaaacagatcaaaataaagagactgcatccacctcttttgtctttggaaagaaagat
gaaaagacagactctgctccaactggatcttcctttgcttttgggctaaaaaaggatggg
gaggaatctaagcagtttctttttggaaaacctgagccaaccaaagtagatggcagtgca
gcatctgctggttttgcttttggtgtgactaatcccacagagaaaaaggatattgaacag
cctggaaaatcagtttttgccttcggtgcgcaaacttcaatcacagatgctggagcttcc
aaacaaccttttagttttctgaccaatgtctcctccactgcagcttcatcaagcacttgt
ggtgtctccagcagtgtatttggcagtgtgactcagtcaagcactcctgcaacccctagt
aatgtgtttggcagtgctatttcagcaaatgctcctgccccgtctagtggtgtatttgga
aacctcactccatcaaatgcccctgcagcttctagcactttgtttggtaacgttgctccc
tcaagtactccttctggctccagtggtttgtttggcactgcagctgcatccagtactcct
gccacttccactagcttgtttggctctgcagctaaattgagtgctcctgcaagctctgga
ggggtgttcaacagtgcagctcctgctgccccagcatcaactgcaagtagtgtgtttggc
agtgtagcctcttcaacaaacacttctgcaaattctgcaaacatatttggaagctctggt
ggagcggccactgctcctggggcttttgtgtttggacagccagctagtactgctagcact
gtttttggaaactcgagcgaatcaaaatcgacctttgttttctctggtcaggaaaataaa
cccgtgacctctgcaagtacttctgtgactccatttctatttggagcagtgtctgccagt
actaccccagcagctccaggttttaactttggacgaacaatcacttcaaatacaacaggc
actagctcgtctccatttatctttggtgctggcgcaagtggctctgcttcttcaagtata
acggctcaggccaatccagtgccagcatttgggcaaagttctaacccgtctactgcacct
gcttttggctcttcaacttcagttccagtgtttccagctgggaattctcagcaagtcccg
gcctttggttcgagtagtgcacaaccccctgtgtttgggcaacaagccactcagccttct
tttggatctcctgctgcacccagtgctggatctggtttcccgtttggcaacaacgcaaac
ttcaactttaacagcacaaattcatcaggtggagtcttcacttttaatgcaaattcagga
tccaccacccaaccacctcccccaggatacatgtttaatgcagctgcgccaggttttaac
atgggaacgaatggcaggacgactccagcatctactatttctactcgcaagataaagacc
gccagaagaagaaagtaa
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integrated database retrieval system
