Xenopus laevis (African clawed frog): 398425
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Entry
398425 CDS
T01010
Symbol
pcna.L, PCNA
Name
(RefSeq) proliferating cell nuclear antigen L homeolog
KO
K04802
proliferating cell nuclear antigen
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03030
DNA replication
xla03410
Base excision repair
xla03420
Nucleotide excision repair
xla03430
Mismatch repair
xla04110
Cell cycle
xla04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
398425 (pcna.L)
03410 Base excision repair
398425 (pcna.L)
03420 Nucleotide excision repair
398425 (pcna.L)
03430 Mismatch repair
398425 (pcna.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xla03032
]
398425 (pcna.L)
03400 DNA repair and recombination proteins [BR:
xla03400
]
398425 (pcna.L)
DNA replication proteins [BR:
xla03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
398425 (pcna.L)
DNA repair and recombination proteins [BR:
xla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
398425 (pcna.L)
MMR (mismatch excision repair)
Other MMR factors
398425 (pcna.L)
TLS (translesion DNA synthesis) factors
Other TLS factors
398425 (pcna.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PCNA_C
PCNA_N
Rad1
Rad9
Hus1
AMA-1
Motif
Other DBs
NCBI-GeneID:
398425
NCBI-ProteinID:
NP_001082364
Xenbase:
XB-GENE-17342178
UniProt:
Q9I893
A0A974HTI9
LinkDB
All DBs
Position
3L:130464147..130469121
Genome browser
AA seq
261 aa
AA seq
DB search
MFEARLVQGSILKKVLEALKDLIDEACWDITSSGISLQSMDSSHVSLVQLTLRSDGFDTY
RCDRNQSIGVKMSSMSKILKCAAGEDIITLRAEDNADTVTMVFESPNQEKVSDYEMKLMD
LDVEQLGIPEQEYSCVIKMPSGEFARICRDLSQIGDAVVISCAKDGVKFSASGELGTGNV
KLSQTSNVDKEEEAVTIEMNEPVQLTFALRYLNFFTKATPLSPTVILSMSADIPLVVEYK
IADMGHVKYYLAPKIEDEEAS
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaggctcgcttggtgcagggttccatcctgaagaaagtgttggaggccctgaag
gacctgatcgatgaggcgtgctgggacattacatcgagcggcatcagcctgcagagcatg
gactcctcgcacgtctcgctggtccagctcactctgcgatcagacggctttgacacctac
cgatgtgatcgcaatcaatctatcggcgtcaagatgagcagtatgtccaaaatcttgaag
tgtgccgcaggtgaagatataattactctgagggcagaagacaatgcggatacagtcaca
atggtgtttgagtctccaaatcaagagaaagtttcagactatgaaatgaagctgatggac
cttgatgtggagcagctcggcattcctgagcaagagtacagctgtgtaataaagatgcca
tctggtgaatttgcacgcatctgccgagatctcagccagattggcgatgcagtagtcatt
tcttgtgcgaaggatggggtaaagttctctgcgagcggagagctgggaactggaaatgtt
aagctctcacagacttcaaatgtggataaagaggaggaagctgttacaatagaaatgaat
gagccagtacagctcacatttgcattgcggtatctgaacttcttcaccaaagctacaccc
ctgtccccaacagttatactcagtatgtctgcagatatcccacttgttgtggaatacaaa
atcgcagatatgggtcatgtgaaatactacctggctcccaagattgaagatgaagaagct
tcttaa
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integrated database retrieval system
