Xenopus laevis (African clawed frog): 398461
Help
Entry
398461 CDS
T01010
Symbol
pdlim1.S, clim1, clp-36, clp36, elfin, elfin-like
Name
(RefSeq) PDZ and LIM domain 1 S homeolog
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
398461 (pdlim1.S)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xla04990
]
398461 (pdlim1.S)
Domain-containing proteins not elsewhere classified [BR:
xla04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
398461 (pdlim1.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Lar_restr_allev
Motif
Other DBs
NCBI-GeneID:
398461
NCBI-ProteinID:
NP_001082426
Xenbase:
XB-GENE-17343112
UniProt:
Q7ZYS4
A0A8J0PSM3
LinkDB
All DBs
Position
7S:28948692..28989883
Genome browser
AA seq
325 aa
AA seq
DB search
MATKRVVMTGPSPWGFRLVGGKDFEQPLTISRVMPGSKAAVADLCIGDVVIAIDGENTDR
MTHLEAQNKIKGCEDELILTINRAESKIWSPLASEDGKPNPYKMNLASNPQELKQIGSAH
NRSALPFTAASASSTPKVITAQYNNPAGLYSSDNIQNFNTALESKSTPVAQVPSKASEQT
QPAHTRHIDKDSEVYKMLQENQESEEAPRQSTSFLVLQEILESDETGEKPSGFRSVRAPA
TKVAASVGSGQKLPICDHCGSGIVGAFVKIRDKPRHPECYACTDCGMNLKQKGHFFVEDK
MYCEKHARERMTPPEGYDVVTVFPK
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggctactaaacgtgtcgtaatgactgggccttcaccttggggatttcggctggttgga
gggaaagatttcgaacagcccttaactatttcaagggtaatgccaggaagcaaagctgca
gttgcggatctgtgtatcggagatgtagtcattgctattgatggggaaaacacagatcga
atgactcatttagaagcacagaataaaattaagggctgtgaagatgaattaattctcaca
ataaacagggctgaatcgaaaatatggtctcctcttgcctctgaagatggaaaaccaaat
ccatataagatgaacttagcaagtaacccacaggaattaaaacaaataggaagtgcacat
aatcgaagtgctttgccgttcactgctgcctcagcttccagcacccccaaagtgatcact
gctcagtacaacaacccagccggcctctattcttctgacaacatacagaacttcaatact
gctctggagagcaaatcaactcccgttgcccaagtaccaagcaaagcttcagaacaaaca
cagccagcacatacccgacacattgataaagactcggaagtttacaagatgctgcaagag
aatcaggaatcagaggaagcccctaggcagtcgacttctttcttggtcctgcaggaaatc
ttggaatctgacgaaacaggggaaaaaccatctgggttccgaagcgtaagagcacccgcc
actaaagtcgcagcctctgtgggaagtggacaaaaactgccaatttgtgatcactgtggc
tcaggcattgtgggagcatttgtgaagattcgggacaaacctcgtcaccctgaatgctac
gcttgcactgactgcgggatgaatctcaagcagaaaggccacttctttgtagaagacaag
atgtactgtgaaaagcacgcacgggagcgcatgacacctcctgagggatacgacgtggtc
accgtgttccccaaataa
DBGET
integrated database retrieval system
