Xenopus laevis (African clawed frog): 398464
Help
Entry
398464 CDS
T01010
Symbol
krt12.5.S, krt12, krt12.1, krt12.L, krt12.S, xk81b2
Name
(RefSeq) keratin, type I cytoskeletal 47 kDa
KO
K07604
type I keratin, acidic
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
398464 (krt12.5.S)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xla04812
]
398464 (krt12.5.S)
04147 Exosome [BR:
xla04147
]
398464 (krt12.5.S)
Cytoskeleton proteins [BR:
xla04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
398464 (krt12.5.S)
Exosome [BR:
xla04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
398464 (krt12.5.S)
Exosomal proteins of other body fluids (saliva and urine)
398464 (krt12.5.S)
Exosomal proteins of colorectal cancer cells
398464 (krt12.5.S)
Exosomal proteins of melanoma cells
398464 (krt12.5.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Plectin_PPL
GapR_DNA-bd
YabA
Lzipper-MIP1
Motif
Other DBs
NCBI-GeneID:
398464
NCBI-ProteinID:
NP_001082432
Xenbase:
XB-GENE-1219328
UniProt:
Q4QR57
A0A974BSJ7
LinkDB
All DBs
Position
9_10S:1175573..1179217
Genome browser
AA seq
454 aa
AA seq
DB search
MSFRSSSSYSLQSKGISGGGGYGAGFGGGSGAGFGGGSGAGFGGGYGAGFGGGASSGFSL
SSAGGFGAAAASSSFSNFGGNDKQTMQNLNDRLASYLEKVRALEAANADLELKIREWYEK
QKGSGIGAGSKDFSKYFEIISDLRNKILSATIDNSRVVLQIDNAKLAADDFRLKFENELA
LRQSVETDINGLRRVLDELTLARGDLEMQIESLTEELAYLKKNHEEEMSIAKSSSAGQVN
VEMDAAPGIDLNKILSDMRADYETLAEKNRRDAELWFNQKSGELKKEIQTGVEQVQTSKS
EINDLRRSLQSLEIELQSQLAMKKSLEDTLAETDGRYGAQLQTIQFSIRSLEEQLLQIRS
DMERQNMEYRQLLDIKTRLEMEIETYRRLLEGEFGSSSSLKSSIVQATEVSTSQSSSSSK
KDPSKTRKVKTIVEEVVDGKVVSSRVEEIEESVK
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgtcattccgttccagctcttcttactctctacagagcaaaggcatctctggaggtggt
ggctatggagcaggctttggtggtggctctggagcaggctttggtggtggctctggagca
ggctttggtggtggctatggagcaggctttggtggtggtgcatcttctgggttttccctt
agttctgcaggtggttttggagcagctgctgccagttccagcttcagcaactttggtggt
aatgataagcaaaccatgcagaacctcaatgaccgtcttgcttcctacctggagaaagta
agagccctggaagcagccaatgctgacctggaactgaagatccgtgagtggtatgagaag
caaaaagggtctggtattggagctgggtctaaggatttcagcaaatactttgaaatcatc
agtgatttgaggaacaagatcctttcagccaccattgataactcaagagttgttctgcaa
attgacaatgccaaacttgctgctgatgacttccgcctgaagtttgagaatgagctggct
cttcgccagagtgtggagactgatatcaatggcttgcgtagagtcctggatgagctgacc
cttgctagaggtgaccttgagatgcagattgagagcttgactgaagagctggcctacctc
aagaagaaccatgaggaggagatgagtattgctaagagcagctctgctggacaagtgaat
gtagaaatggatgctgctccaggcatagatctgaacaagattctcagtgacatgagagcg
gactatgaaacactggctgaaaagaacagaagagatgcagagctgtggtttaaccagaag
agcggtgagctgaagaaagagattcaaacaggtgtggaacaagtgcagacaagcaagagt
gaaataaatgacctcagacgcagccttcagagtttggaaattgaattgcaatctcaactg
gcaatgaaaaaatctctggaagacaccctggcagaaacagatggccgatatggtgcacag
cttcaaacaattcagttcagtatcagaagcctggaggaacaacttctgcagatcaggtct
gacatggaacgtcagaacatggagtacaggcagctccttgacattaagaccagactagaa
atggagattgaaacatacaggcgcctgttggagggagaatttggttcatctagttcatta
aagtcttcaatagtacaagctactgaagtttccacatcacaatcatcttccagctccaaa
aaagatccatcaaaaaccagaaaagtaaagactatcgtggaagaagtggtagatggaaag
gttgtttcatcaagagtcgaggaaattgaagagagcgttaaataa
DBGET
integrated database retrieval system
